Carolline Pires

Dr. Carolline Pires


Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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26 September 2021 in Genetic Resources and Crop Evolution
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Journal Article
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CPCarolline Pires
Carolline Pires
MCMarcones Ferreira Costa
Marcones Ferreira Costa
MZMaria Imaculada Zucchi
Maria Imaculada Zucchi
RFRegina Lucia Ferreira-Gomes
Regina Lucia Ferreira-Gomes
JPJosé Baldin Pinheiro
José Baldin Pinheiro
ÂLÂngela Celis de Almeida Lopes
Ângela Celis de Almeida Lopes

19 November 2024 in Plants
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Journal Article
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CPCarolline Pires
Carolline Pires
JNJosé Ribamar Costa Ferreira Neto
José Ribamar Costa Ferreira Neto
RSRoberta Lane de Oliveira Silva
Roberta Lane de Oliveira Silva
JSJéssica Barboza da Silva
Jéssica Barboza da Silva
MSManassés Daniel Da Silva
Manassés Daniel Da Silva
ABAna Benko-Iseppon
Ana Benko-Iseppon
Cowpea (Vigna unguiculata (L.) Walp.) is an important legume cultivated mainly in regions with limited water availability across the African and American continents. Its productivity is significantly affected by environmental stresses. Thaumatin-like proteins (TLPs), which belong to the PR-5 (pathogenesis-related 5) protein family, are known to be responsive to both biotic and abiotic stresses. However, their role remains controversial, with some TLPs associated with plant defense (particularly against fungal infections) and others associated with abiotic stresses response. In this study, we evaluated the structural diversity and gene expression of TLPs in cowpea (VuTLPs) under different stress conditions, including biotic [mechanical injury followed by inoculation with Cowpea Aphid-borne Mosaic Virus (CABMV) or Cowpea Severe Mosaic Virus (CPSMV)] and abiotic (root dehydration). Genomic anchoring of VuTLPs revealed 34 loci encoding these proteins. Neighbor- joining analysis clustered the VuTLPs into three distinct groups. We identified 15 segmental duplication and 6 tandem duplication gene pairs, with the majority of VuTLP genes found to be under purifying selection. Promoter analysis associated VuTLPs with bHLH, Dof-type, and MYB- related transcription factors, supporting their diverse roles. Diversity in VuTLP function was also observed in their expression profiles under the studied stress conditions. Gene expression data showed that most VuTLPs are recruited within the first minutes after biotic stress imposition. For the root dehydration assay, the most transcripts were up-regulated 150 min post-stress. Moreover, the gene expression data suggested that VuTLPs exhibit functional specialization depending on the stress condition, highlighting their diverse roles and biotechnological potential.

9 September 2024 in Preprints.org
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Preprint
Open access
PDF file
CPCarolline Pires
Carolline Pires
JNJosé Ribamar Costa Ferreira Neto
José Ribamar Costa Ferreira Neto
RSRoberta Lane de Oliveira Silva
Roberta Lane de Oliveira Silva
JSJéssica Barboza da Silva
Jéssica Barboza da Silva
MSManassés Daniel Da Silva
Manassés Daniel Da Silva
ABAna Benko-Iseppon
Ana Benko-Iseppon
Cowpea (Vigna unguiculata (L.) Walp.) is an important legume cultivated mainly in regions with limited water availability across the African and American continents. Its productivity is significantly affected by environmental stresses. Thaumatin-like proteins (TLPs), which belong to the PR-5 (Pathogenesis-Related 5) protein family, are known to be responsive to both biotic and abiotic stresses. However, their role remains controversial, with some TLPs associated with plant defense (particularly against fungal infections) and others associated with drought response. In this study, we evaluated the structural diversity and gene expression of TLPs in cowpea (VuTLPs) under different stress conditions, including biotic [mechanical injury followed by inoculation with Cowpea Aphid-borne Mosaic Virus (CABMV) or Cowpea Severe Mosaic Virus (CPSMV)] and abiotic (root dehydration). Genomic anchoring of VuTLPs revealed 34 loci encoding these proteins. Neighbor-joining analysis clustered the VuTLPs into three distinct groups. We identified 15 segmental duplication and six tandem duplication gene pairs, with the majority of VuTLP genes found to be under purifying selection. Promoter analysis associated VuTLPs with bHLH, Dof-type, and MYB-related transcription factors, supporting their diverse roles. Diversity in VuTLP function was also observed in their expression profiles under various stress conditions. Gene expression data showed that most VuTLPs are recruited within the first minutes after stress imposition, except in the root dehydration assay, where most transcripts were induced 150 minutes post-stress, a finding also validated by qPCR. Moreover, the data suggest that VuTLPs exhibit functional specialization depending on the stress condition, highlighting their diverse roles and biotechnological potential.