Jose Lopes

Dr. Jose Lopes


Research Focus & Metrics

Academic Career Length

21Years (2006-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
27 September 2014 in Protein Science
Verified
Journal Article
Open access
PDF file
JLJose Lopes
Jose Lopes
AMAndrew J. Miles
Andrew J. Miles
LWLee Whitmore
Lee Whitmore
BWB. A. Wallace
B. A. Wallace
Circular dichroism (CD) spectroscopy is a valuable method for defining canonical secondary structure contents of proteins based on empirically‐defined spectroscopic signatures derived from proteins with known three‐dimensional structures. Many proteins identified as being “Intrinsically Disordered Proteins” have a significant amount of their structure that is neither sheet, helix, nor turn; this type of structure is often classified by CD as “other”, “random coil”, “unordered”, or “disordered”. However the “other” category can also include polyproline II (PPII)‐type structures, whose spectral properties have not been well‐distinguished from those of unordered structures. In this study, synchrotron radiation circular dichroism spectroscopy was used to investigate the spectral properties of collagen and polyproline, which both contain PPII‐type structures. Their native spectra were compared as representatives of PPII structures. In addition, their spectra before and after treatment with various conditions to produce unfolded or denatured structures were also compared, with the aim of defining the differences between CD spectra of PPII and disordered structures. We conclude that the spectral features of collagen are more appropriate than those of polyproline for use as the representative spectrum for PPII structures present in typical amino acid‐containing proteins, and that the single most characteristic spectroscopic feature distinguishing a PPII structure from a disordered structure is the presence of a positive peak around 220nm in the former but not in the latter. These spectra are now available for inclusion in new reference data sets used for CD analyses of the secondary structures of soluble proteins.

1 January 2006 in Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics
Verified
Journal Article
Closed access
MTMelissa B. Trindade
Melissa B. Trindade
JLJose Lopes
Jose Lopes
ASAndréa Soares-Costa
Andréa Soares-Costa
AMAna Cristina Monteiro-Moreira
Ana Cristina Monteiro-Moreira
RMRenato A. Moreira
Renato A. Moreira
LBLeila Beltramini
Leila Beltramini

1 May 2009 in Phytochemistry
Verified
Journal Article
Closed access
JLJose Lopes
Jose Lopes
NVN.F. Valadares
N.F. Valadares
DMD.I. Moraes
D.I. Moraes
JRJose Cesar Rosa
Jose Cesar Rosa
HAH.S.S. Araújo
H.S.S. Araújo
LBLeila Beltramini
Leila Beltramini

1 June 2018 in International Journal of Biological Macromolecules
Verified
Journal Article
Closed access
TFThais Pontes Carvalho Fontenelle
Thais Pontes Carvalho Fontenelle
GLGlauber Cruz Lima
Glauber Cruz Lima
JMJacilane Ximenes Mesquita
Jacilane Ximenes Mesquita
JLJose Lopes
Jose Lopes
TBTarcísio Vieira de Brito
Tarcísio Vieira de Brito
AFAna Lúcia Ponte Freitas
Ana Lúcia Ponte Freitas

1 October 2011 in Biochimica et Biophysica Acta (BBA) - Biomembranes
Verified
Journal Article
Closed access
CFCleverson D. T. Freitas
Cleverson D. T. Freitas
JLJose Lopes
Jose Lopes
LBLeila Beltramini
Leila Beltramini
RORaquel Sombra Basílio de Oliveira
Raquel Sombra Basílio de Oliveira
JOJosé Tadeu Abreu Oliveira
José Tadeu Abreu Oliveira
MRMárcio Viana Ramos
Márcio Viana Ramos

27 October 2014 in PLOS ONE
Verified
Journal Article
Open access
PDF file
ABAdelina B. Batista
Adelina B. Batista
JOJosé T. A. Oliveira
José T. A. Oliveira
JGJuliana M. Gifoni
Juliana M. Gifoni
MPMirella L. Pereira
Mirella L. Pereira
MAMarina G. G. Almeida
Marina G. G. Almeida
IVIlka Vasconcelos
Ilka Vasconcelos
Mo-CBP3 is a chitin-binding protein purified from Moringa oleifera Lam. seeds that displays inhibitory activity against phytopathogenic fungi. This study investigated the structural properties and the antifungal mode of action of this protein. To this end, circular dichroism spectroscopy, antifungal assays, measurements of the production of reactive oxygen species and microscopic analyses were utilized. Mo-CBP3 is composed of 30.3% α-helices, 16.3% β-sheets, 22.3% turns and 30.4% unordered forms. The Mo-CBP3 structure is highly stable and retains its antifungal activity regardless of temperature and pH. Fusarium solani was used as a model organism for studying the mechanisms by which this protein acts as an antifungal agent. Mo-CBP3 significantly inhibited spore germination and mycelial growth at 0.05 mg.mL−1. Mo-CBP3 has both fungistatic and fungicidal effects, depending on the concentration used. Binding of Mo-CBP3 to the fungal cell surface is achieved, at least in part, via electrostatic interactions, as salt was able to reduce its inhibitory effect. Mo-CBP3 induced the production of ROS and caused disorganization of both the cytoplasm and the plasma membrane in F. solani cells. Based on its high stability and specific toxicity, with broad-spectrum efficacy against important phytopathogenic fungi at low inhibitory concentrations but not to human cells, Mo-CBP3 has great potential for the development of new antifungal drugs or transgenic crops with enhanced resistance to phytopathogens.