Paul Johnson

Prof. Paul Johnson


Research Focus & Metrics

Academic Career Length

24Years (2003-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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13 January 2016 in BMC Genomics
Verified
Journal Article
Open access
PDF file
BBBradley Bushman
Bradley Bushman
KAKeenan L. Amundsen
Keenan L. Amundsen
SWScott E. Warnke
Scott E. Warnke
Joseph RobinsJoseph Robins
Joseph Robins
PJPaul Johnson
Paul Johnson
Kentucky bluegrass (Poa pratensis L.) is a prominent turfgrass in the cool-season regions, but it is sensitive to salt stress. Previously, a relatively salt tolerant Kentucky bluegrass accession was identified that maintained green colour under consistent salt applications. In this study, a transcriptome study between the tolerant (PI 372742) accession and a salt susceptible (PI 368233) accession was conducted, under control and salt treatments, and in shoot and root tissues. Sample replicates grouped tightly by tissue and treatment, and fewer differentially expressed transcripts were detected in the tolerant PI 372742 samples compared to the susceptible PI 368233 samples, and in root tissues compared to shoot tissues. A de novo assembly resulted in 388,764 transcripts, with 36,587 detected as differentially expressed. Approximately 75 % of transcripts had homology based annotations, with several differences in GO terms enriched between the PI 368233 and PI 372742 samples. Gene expression profiling identified salt-responsive gene families that were consistently down-regulated in PI 372742 and unlikely to contribute to salt tolerance in Kentucky bluegrass. Gene expression profiling also identified sets of transcripts relating to transcription factors, ion and water transport genes, and oxidation-reduction process genes with likely roles in salt tolerance. The transcript assembly represents the first such assembly in the highly polyploidy, facultative apomictic Kentucky bluegrass. The transcripts identified provide genetic information on how this plant responds to and tolerates salt stress in both shoot and root tissues, and can be used for further genetic testing and introgression.

1 September 2006 in Crop Science
Verified
Journal Article
Closed access
PDF file
PJPaul Johnson
Paul Johnson
SLSteve R. Larson
Steve R. Larson
AAAmy L. Anderton
Amy L. Anderton
JPJason T. Patterson
Jason T. Patterson
Douglas J. CattaniDouglas J. Cattani
Douglas J. Cattani
ENEric K. Nelson
Eric K. Nelson

1 May 2003 in Agronomy Journal
Verified
Journal Article
Closed access
PDF file
PJPaul Johnson
Paul Johnson
RKR. T. Koenig
R. T. Koenig
KKK. L. Kopp
K. L. Kopp

1 January 2009 in HortTechnology
Verified
Journal Article
Closed access
PDF file
LBLandon D. Bunderson
Landon D. Bunderson
PJPaul Johnson
Paul Johnson
KKKelly L. Kopp
Kelly L. Kopp
ADAdam Van Dyke
Adam Van Dyke
Visual ratings are the standard for evaluating turfgrass quality. However, to provide more objective evaluations and to address statistical concerns, other methods have been developed to measure turfgrass quality, including digital image analysis and measurements of chlorophyll content. These have been largely applied to traditionally used turfgrass species, but here we used these methods to evaluate turfgrass quality of nontraditional species and mixtures that are native or adapted to the intermountain west region of North America. Two fertilizer treatments (1.0 or 2.0 lb/1000 ft2 nitrogen) were applied to 21 different species and species mixtures in North Logan, UT. These plots were irrigated to replace 60% of the local evapotranspiration rate and were mowed at 4 inches. Turfgrass quality ratings were most effective in measuring quality among the diverse species used in this study. Because of the wider variation in acceptable visual characteristics and lower quality expectations for low-maintenance native turf, the objective evaluation methods proved less useful. Generally, chlorophyll meter data, digital image analysis of cover, and digital image analysis of color data were not well correlated with human visual quality ratings in this study. Measurements were well correlated in some species, but not in others. These methods can supplement, but cannot replace, human visual turfgrass quality ratings for comparison of dissimilar grasses.

25 September 2019 in Agronomy
Verified
Journal Article
Open access
PDF file
JMJohn S. Mortenson
John S. Mortenson
BWBlair Waldron
Blair Waldron
Steven R. LarsonSteven R. Larson
Steven R. Larson
Kevin JensenKevin Jensen
Kevin Jensen
LDLee DeHaan
Lee DeHaan
JCJ. Earl Creech
J. Earl Creech
It has been hypothesized that the genetic control of forage traits, especially biomass, for grass plants growing as spaced-plants versus swards is different. Likewise, the genetic control of compatibility in grass–legume polyculture mixtures is assumed to be different than for forage production in a grass monoculture. However, these hypotheses are largely unvalidated, especially at the DNA level. This study used an intermediate wheatgrass mapping population to examine the effect of three competition environments (spaced-plants, polyculture, and monoculture) on classical quantitative genetic parameters and quantitative trait loci (QTL) identification for biomass, morphology, and forage nutritive value. Moderate to high heritable variation was observed for biomass, morphological traits, and nutritive value within all three environments (H ranged from 0.50 to 0.87). Genetic correlations (rG) among environments for morphology and nutritive value were predominantly high, however, were moderately-low (0.30 to 0.48) for biomass. Six biomass QTL were identified, including three on linkage groups (LG) 1, 6, and 15 that were only expressed in the monoculture environment. Moreover, three biomass QTL on LG 10, 14, and 15 exhibited significant QTL by environment interactions. This study verified that the genetic control of grass biomass in a monoculture versus a grass–legume mixture is only partially the same, with additional genes expressed in monoculture, and that biomass in widely spaced-plants versus swards is predominantly under different genetic control. These results indicate that selection for improved grass biomass will be most successful when conducted within the targeted monoculture or polyculture sward environment per se.

1 January 2003 in Agronomy Journal
Verified
Journal Article
Closed access
PDF file
PJPaul Johnson
Paul Johnson
RKR. T. Koenig
R. T. Koenig
KKK. L. Kopp
K. L. Kopp