Nikola Habek

Prof. Dr. Nikola Habek


Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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14 October 2022 in Science Advances
Verified
Journal Article
Open access
MBMykhailo Y. Batiuk
Mykhailo Y. Batiuk
TTTeadora Tyler
Teadora Tyler
KDKatarina Dragicevic
Katarina Dragicevic
SMShenglin Mei
Shenglin Mei
RRRasmus Rydbirk
Rasmus Rydbirk
KKKonstantin Khodosevich
Konstantin Khodosevich
Schizophrenia is one of the most widespread and complex mental disorders. To characterize the impact of schizophrenia, we performed single-nucleus RNA sequencing (snRNA-seq) of >220,000 neurons from the dorsolateral prefrontal cortex of patients with schizophrenia and matched controls. In addition, >115,000 neurons were analyzed topographically by immunohistochemistry. Compositional analysis of snRNA-seq data revealed a reduction in abundance of GABAergic neurons and a concomitant increase in principal neurons, most pronounced for upper cortical layer subtypes, which was substantiated by histological analysis. Many neuronal subtypes showed extensive transcriptomic changes, the most marked in upper-layer GABAergic neurons, including down-regulation in energy metabolism and up-regulation in neurotransmission. Transcription factor network analysis demonstrated a developmental origin of transcriptomic changes. Last, Visium spatial transcriptomics further corroborated upper-layer neuron vulnerability in schizophrenia. Overall, our results point toward general network impairment within upper cortical layers as a core substrate associated with schizophrenia symptomatology.

3 June 2021 in Journal of Neurochemistry
Verified
Journal Article
Open access
PDF file
Kristina Mlinac-JerkovićKristina Mlinac-Jerković
Kristina Mlinac-Jerković
KIKatarina Ilic
Katarina Ilic
MZMilorad Zjalić
Milorad Zjalić
DMDario Mandic
Dario Mandic
ŽDŽeljko Debeljak
Željko Debeljak
Marija HefferMarija Heffer
Marija Heffer
Lipid rafts, membrane microdomains enriched with (glyco)sphingolipids, cholesterol, and select proteins, act as cellular signalosomes. Various methods have been used to separate lipid rafts from bulk (non-raft) membranes, but most often non-ionic detergent Triton X-100 has been used in their isolation. However, Triton X-100 is a reported disruptor of lipid rafts. Histological evidence confirmed raft disruption by Triton X-100 but remarkably revealed raft stability to treatment with a related polyethylene oxide detergent, Brij O20. We report isolation of detergent-resistant membranes from mouse brain using Brij O20 and its use to determine the distribution of major mammalian brain gangliosides, GM1, GD1a, GD1b and GT1b. A different distribution of gangliosides – classically used as a raft marker - was discovered using Brij O20 versus Triton X-100. Immunohistochemistry and imaging mass spectrometry confirm the results. Use of Brij O20 results in a distinctive membrane distribution of gangliosides that is not all lipid raft associated but depends on the ganglioside structure. This is the first report of a significant proportion of gangliosides outside raft domains. We also determined the distribution of proteins functionally related to neuroplasticity and known to be affected by ganglioside environment, glutamate receptor subunit 2, amyloid precursor protein and neuroplastin and report the lipid raft populations of these proteins in mouse brain tissue. This work will enable more accurate lipid raft analysis with respect to glycosphingolipid and membrane protein composition and lead to improved resolution of lipid-protein interactions within biological membranes.

26 October 2019 in European Journal of Neuroscience
Verified
Journal Article
Closed access
PDF file
ADAleksandra Dugandzic
Aleksandra Dugandzic
MRMartina Ratko
Martina Ratko
NHNikola Habek
Nikola Habek

1 August 2020 in Croatian Medical Journal
Verified
Journal Article
Open access
MRMartina Ratko
Martina Ratko
NHNikola Habek
Nikola Habek
MKMilan Kordić
Milan Kordić
Aleksandra DugandzicAleksandra Dugandzic
Aleksandra Dugandzic
To determine the changes in skin temperature and brown adipose tissue (BAT) activity throughout the estrous cycle as well as the regularity of the estrous cycle in mice.We assessed the differences in the duration of the estrous cycle and its phases between ...

4 May 2022 in European Journal of Neuroscience
Verified
Journal Article
Open access
MRMartina Ratko
Martina Ratko
NHNikola Habek
Nikola Habek
MRMarina Dobrivojević Radmilović
Marina Dobrivojević Radmilović
SŠSiniša Škokić
Siniša Škokić
HJHelena Justić
Helena Justić
Aleksandra DugandzicAleksandra Dugandzic
Aleksandra Dugandzic
Stroke is one of the leading causes of mortality and disability worldwide. By affecting bradykinin function, activation of guanylate cyclase (GC)-A has been shown to have a neuroprotective effect after ischaemic stroke, whereas the same has not been confirmed for GC-B; therefore, we aimed to determine the possible role of GC-C and its agonist, uroguanylin (UGN), in the development of stroke. In this study, middle cerebral artery occlusion (MCAO) was performed on wild-type (WT), GC-C KO and UGN KO mice. MR images were acquired before and 24 h after MCAO. On brain slices 48 h after MCAO, the Ca2+ response to UGN stimulation was recorded. Our results showed that the absence of GC-C in GC-C KO mice resulted in the development of smaller ischaemic lesions compared with WT littermates, which is an opposite effect compared with the effects of GC-A agonists on brain lesions. WT and UGN KO animals showed a stronger Ca2+ response upon UGN stimulation in astrocytes of the peri-ischaemic cerebral cortex compared with the same cortical region of the unaffected contralateral hemisphere. This stronger activation was not observed in GC-C KO animals, which may be the reason for smaller lesion development in GC-C KO mice. The reason why GC-C might affect Ca2+ signalling in peri-ischaemic astrocytes is that GC-C is expressed in these cells after MCAO, whereas under normoxic conditions, it is expressed mainly in cortical neurons. Stronger activation of the Ca2+-dependent signalling pathway could lead to the stronger activation of the Na+/H+ exchanger, tissue acidification and neuronal death.