Thomas Nowotny

Dr. Thomas Nowotny

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Research Focus & Metrics

Academic Career Length

29Years (1998-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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6 May 2011 in Science
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MPMaria Papadopoulou
Maria Papadopoulou
SCStijn Cassenaer
Stijn Cassenaer
TNThomas Nowotny
Thomas Nowotny
GLGilles Laurent
Gilles Laurent
A single neuron is responsible for adaptive normalization in an olfactory circuit generating sparse odor representations.

1 December 2006 in Journal of Neurophysiology
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Journal Article
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JHJulie S. Haas
Julie S. Haas
TNThomas Nowotny
Thomas Nowotny
HAH.D.I. Abarbanel
H.D.I. Abarbanel
Actions of inhibitory interneurons organize and modulate many neuronal processes, yet the mechanisms and consequences of plasticity of inhibitory synapses remain poorly understood. We report on spike-timing-dependent plasticity of inhibitory synapses in the entorhinal cortex. After pairing presynaptic stimulations at time tpre with evoked postsynaptic spikes at time tpost under pharmacological blockade of excitation we found, via whole cell recordings, an asymmetrical timing rule for plasticity of the remaining inhibitory responses. Strength of response varied as a function of the time interval Δ t = tpost − tpre: for Δ t > 0 inhibitory responses potentiated, peaking at a delay of 10 ms. For Δ t < 0, the synaptic coupling depressed, again with a maximal effect near 10 ms of delay. We also show that changes in synaptic strength depend on changes in intracellular calcium concentrations and demonstrate that the calcium enters the postsynaptic cell through voltage-gated channels. Using network models, we demonstrate how this novel form of plasticity can sculpt network behavior efficiently and with remarkable flexibility.

7 January 2016 in Scientific Reports
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Journal Article
Open access
EYEsin Yavuz
Esin Yavuz
JTJames Turner
James Turner
TNThomas Nowotny
Thomas Nowotny
Large-scale numerical simulations of detailed brain circuit models are important for identifying hypotheses on brain functions and testing their consistency and plausibility. An ongoing challenge for simulating realistic models is, however, computational speed. In this paper, we present the GeNN (GPU-enhanced Neuronal Networks) framework, which aims to facilitate the use of graphics accelerators for computational models of large-scale neuronal networks to address this challenge. GeNN is an open source library that generates code to accelerate the execution of network simulations on NVIDIA GPUs, through a flexible and extensible interface, which does not require in-depth technical knowledge from the users. We present performance benchmarks showing that 200-fold speedup compared to a single core of a CPU can be achieved for a network of one million conductance based Hodgkin-Huxley neurons but that for other models the speedup can differ. GeNN is available for Linux, Mac OS X and Windows platforms. The source code, user manual, tutorials, Wiki, in-depth example projects and all other related information can be found on the project website http://genn-team.github.io/genn/.

11 February 2025 in Nature Communications
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JYJason Yik
Jason Yik
KBKorneel Van Den Berghe
Korneel Van Den Berghe
DBDouwe Den Blanken
Douwe Den Blanken
YBYounes Bouhadjar
Younes Bouhadjar
MFMaxime Fabre
Maxime Fabre
VRVijay Janapa Reddi
Vijay Janapa Reddi
Neuromorphic computing shows promise for advancing computing efficiency and capabilities of AI applications using brain-inspired principles. However, the neuromorphic research field currently lacks standardized benchmarks, making it difficult to accurately measure technological advancements, compare performance with conventional methods, and identify promising future research directions. This article presents NeuroBench, a benchmark framework for neuromorphic algorithms and systems, which is collaboratively designed from an open community of researchers across industry and academia. NeuroBench introduces a common set of tools and systematic methodology for inclusive benchmark measurement, delivering an objective reference framework for quantifying neuromorphic approaches in both hardware-independent and hardware-dependent settings. For latest project updates, visit the project website (neurobench.ai).

1 August 2004 in Neural Computation
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Journal Article
Closed access
RHRamon Huerta
Ramon Huerta
TNThomas Nowotny
Thomas Nowotny
MGMarta García-Sanchez
Marta García-Sanchez
HAH. D. I. Abarbanel
H. D. I. Abarbanel
MRM. I. Rabinovich
M. I. Rabinovich
We propose a theoretical framework for odor classification in the olfactory system of insects. The classification task is accomplished in two steps. The first is a transformation from the antennal lobe to the intrinsic Kenyon cells in the mushroom body. This transformation into a higher-dimensional space is an injective function and can be implemented without any type of learning at the synaptic connections. In the second step, the encoded odors in the intrinsic Kenyon cells are linearly classified in the mushroom body lobes. The neurons that perform this linear classification are equivalent to hyperplanes whose connections are tuned by local Hebbian learning and by competition due to mutual inhibition. We calculate the range of values of activity and size fo the network required to achieve efficient classification within this scheme in insect olfaction. We are able to demonstrate that biologically plausible control mechanisms can accomplish efficient classification of odors.

29 October 2003 in Journal of Neuroscience
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Journal Article
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TNThomas Nowotny
Thomas Nowotny
VZValentin P. Zhigulin
Valentin P. Zhigulin
ASAllan I. Selverston
Allan I. Selverston
HAHenry D. I. Abarbanel
Henry D. I. Abarbanel
MRMikhail I. Rabinovich
Mikhail I. Rabinovich
Synchronization of neural activity is fundamental for many functions of the brain. We demonstrate that spike-timing dependent plasticity (STDP) enhances synchronization (entrainment) in a hybrid circuit composed of a spike generator, a dynamic clamp emulating an excitatory plastic synapse, and a chemically isolated neuron from the Aplysia abdominal ganglion. Fixed-phase entrainment of the Aplysia neuron to the spike generator is possible for a much wider range of frequency ratios and is more precise and more robust with the plastic synapse than with a nonplastic synapse of comparable strength. Further analysis in a computational model of Hodgkin–Huxley-type neurons reveals the mechanism behind this significant enhancement in synchronization. The experimentally observed STDP plasticity curve appears to be designed to adjust synaptic strength to a value suitable for stable entrainment of the postsynaptic neuron. One functional role of STDP might therefore be to facilitate synchronization or entrainment of nonidentical neurons.