Yamei Shen

Prof. Yamei Shen

ZHEJIANG A&F UNIVERSITY, CHINA

Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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23 May 2017 in Plant Methods
Verified
Journal Article
Open access
PDF file
YSYamei Shen
Yamei Shen
DMDong Meng
Dong Meng
KMKim McGrouther
Kim McGrouther
JZJunhong Zhang
Junhong Zhang
LCLailiang Cheng
Lailiang Cheng
Magnolia is a woody ornamental plant, which is widely used in urban landscaping. However, its lengthy juvenile period and recalcitrance to regeneration impedes functional characterization of its genes. We developed an efficient protoplast isolation and transient expression system for Magnolia denudata × Magnolia acuminata ‘Yellow River’. The highest yield of protoplasts was obtained from young leaves digested in 3% Cellulase R10, 0.8% Macerozyme R10, 0.04% pectinase and 0.4 M mannitol enzymolysis solution for 6 h. For transfection of protoplasts, 20% PEG4000 for 5 min was optimal. To verify the protoplast system and begin to understand heat tolerance in Magnolia, a heat shock transcription factor MdeHSF1 was cloned from ‘Yellow River’, which belongs to the HSF subfamily A and has significant homology with AtHSFA1A. Subcellular localization analysis indicated that MdeHSF1 was expressed in the cell nucleus. Furthermore, qPCR analysis of the MdeHSF1 transcript level in response to high temperature stress suggested that MdeHSF1 might be involved in regulating heat stress tolerance in ‘Yellow River’. The described protocol provides a simple and straightforward method for isolating protoplast and exploring gene subcellular localization of MdeHSF1 in Magnolia. This expands the new research of protoplast isolation and transfection in Magnolia.

16 April 2018 in Genes
Verified
Journal Article
Open access
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LFLijie Fan
Lijie Fan
MCMengqian Chen
Mengqian Chen
BDBin Dong
Bin Dong
NWNinghang Wang
Ninghang Wang
QYQin Yu
Qin Yu
YSYamei Shen
Yamei Shen
Magnolias are widely cultivated for their beautiful flowers, but despite their popularity, the molecular mechanisms regulating flower bud differentiation have not been elucidated. Here, we used paraffin sections and RNA-seq to study the process of flower bud differentiation in Magnolia sinostellata. Flower bud development occurred between 28 April and 30 May 2017 and was divided into five stages: undifferentiated, early flower bud differentiation, petal primordium differentiation, stamen primordium differentiation, and pistil primordium differentiation. A total of 52,441 expressed genes were identified, of which 11,592 were significantly differentially expressed in the five bud development stages. Of these, 82 genes were involved in the flowering. In addition, MADS-box and AP2 family genes play critical roles in the formation of flower organs and 20 differentially expressed genes associated with flower bud differentiation were identified in M. sinostellata. A qRT-PCR analysis verified that the MADS-box and AP2 family genes were expressed at high levels during flower bud differentiation. Consequently, this study provides a theoretical basis for the genetic regulation of flowering in M. sinostellata, which lays a foundation for further research into flowering genes and may facilitate the development of new cultivars.

22 August 2018 in Trees
Verified
Journal Article
Closed access
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QYQin Yu
Qin Yu
YSYamei Shen
Yamei Shen
QWQianying Wang
Qianying Wang
XWXingli Wang
Xingli Wang
LFLijie Fan
Lijie Fan
MZMingru Zhang
Mingru Zhang

25 September 2018 in Molecular Genetics and Genomics
Verified
Journal Article
Closed access
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XWXingli Wang
Xingli Wang
WCWenchong Chen
Wenchong Chen
JLJia Luo
Jia Luo
ZYZhangxiu Yao
Zhangxiu Yao
QYQin Yu
Qin Yu
YSYamei Shen
Yamei Shen

11 May 2023 in Atmosphere
Verified
Journal Article
Open access
PDF file
JYJun Shao Yan
Jun Shao Yan
TZTailong Zhang
Tailong Zhang
YWYu Wu
Yu Wu
CLChu Lv
Chu Lv
FQFeng Qi
Feng Qi
YSYamei Shen
Yamei Shen
In recent years, the impact of surface heat islands in urban street canyons has become increasingly apparent. However, the research on the use of trees to mitigate surface heat islands remains limited. To address this gap, this study combines experiments and simulations to analyze the cooling effect of trees on surface temperatures under varying timeframes and layouts in an east–west street canyon. The results reveal that the temperature of the road decreases by 10–15 °C, which is 2–4 times greater than that on the south side. Moreover, at 5:00 p.m. in the afternoon, the cooling effect on the south side is 10.3 °C, which is twice that of the north side. In practical planning and design, the diameter of the tree canopy should be maximized, and trees with leaf-area densities greater than 1.5 m2/m3 should be selected. Additionally, the layout of trees should be optimized to maximize the tree canopy coverage. These findings have important implications for optimizing plant selection and placement in street canyons.

15 May 2018 in Hereditas
Verified
Journal Article
Open access
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ZLZhigao Liu
Zhigao Liu
WSWeili Shao
Weili Shao
YSYamei Shen
Yamei Shen
MJMengcheng Ji
Mengcheng Ji
WCWenchao Chen
Wenchao Chen
YSYongbao Shen
Yongbao Shen
Clematis is the biggest genus in the family Ranunculaceae with about 300 species. Clematis is also a globally important commercial group of flowers, especially in the United States and European countries. Their petals with different colors and shapes make the genus the “Queen of the Vines”. However, the genomic information and phylogeny of Clematis based on existing molecular studies are limited. In this paper, new microsatellites (SSR) markers were identified from the transcriptome data of C. finetiana obtained using the Illumina paired-end sequencing technology. Sequences on a total of 71,900 high-quality unigenes with the mean length of 865 bp were produced in this study. There were 6192unigenes annotated and classified into 49 functional sub-groups in three main ontology categories in GO (Gen Ontology) database,14,022 unigenes mapped to COGs (Clusters of Orthologous Groups) database and classified into 25 functional categories, and 21,494 unigenes obtained and divided into 128 pathways of KEGG (Kyoto Encyclopedia of Genes) Database. A total of 7532 SSRs were discovered from 6337 unigenes. We randomly tested 210 primer pairs, of which 52 primer pairs were able to generate specific products, and 19 possessed polymorphism in the 13 wild populations of six species from Clematis, which were used as a test material. The dataset of C. finetiana transcriptome and the identified new SSR markers will promote genetic research and breeding effort in Clematis.