Qing Lyu

Dr. Qing Lyu

orcid

Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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18 May 2023 in Visual Computing for Industry, Biomedicine, and Art
Verified
Journal Article
Open access
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QLQing Lyu
Qing Lyu
JTJosh Tan
Josh Tan
MZMichael E. Zapadka
Michael E. Zapadka
JPJanardhana Ponnatapura
Janardhana Ponnatapura
CNChuang Niu
Chuang Niu
CWChristopher T. Whitlow
Christopher T. Whitlow
The large language model called ChatGPT has drawn extensively attention because of its human-like expression and reasoning abilities. In this study, we investigate the feasibility of using ChatGPT in experiments on translating radiology reports into plain language for patients and healthcare providers so that they are educated for improved healthcare. Radiology reports from 62 low-dose chest computed tomography lung cancer screening scans and 76 brain magnetic resonance imaging metastases screening scans were collected in the first half of February for this study. According to the evaluation by radiologists, ChatGPT can successfully translate radiology reports into plain language with an average score of 4.27 in the five-point system with 0.08 places of information missing and 0.07 places of misinformation. In terms of the suggestions provided by ChatGPT, they are generally relevant such as keeping following-up with doctors and closely monitoring any symptoms, and for about 37% of 138 cases in total ChatGPT offers specific suggestions based on findings in the report. ChatGPT also presents some randomness in its responses with occasionally over-simplified or neglected information, which can be mitigated using a more detailed prompt. Furthermore, ChatGPT results are compared with a newly released large model GPT-4, showing that GPT-4 can significantly improve the quality of translated reports. Our results show that it is feasible to utilize large language models in clinical education, and further efforts are needed to address limitations and maximize their potential.

18 February 2020 in IEEE Transactions on Medical Imaging
Verified
Journal Article
Closed access
QLQing Lyu
Qing Lyu
HSHongming Shan
Hongming Shan
CSCole Steber
Cole Steber
CHCorbin Helis
Corbin Helis
CWChris Whitlow
Chris Whitlow
Ge WangGe Wang
Ge Wang
Magnetic resonance imaging (MRI) is widely used for screening, diagnosis, image-guided therapy, and scientific research. A significant advantage of MRI over other imaging modalities such as computed tomography (CT) and nuclear imaging is that it clearly shows soft tissues in multi-contrasts. Compared with other medical image super-resolution methods that are in a single contrast, multi-contrast super-resolution studies can synergize multiple contrast images to achieve better super-resolution results. In this paper, we propose a one-level non-progressive neural network for low up-sampling multi-contrast super-resolution and a two-level progressive network for high up-sampling multi-contrast super-resolution. The proposed networks integrate multi-contrast information in a high-level feature space and optimize the imaging performance by minimizing a composite loss function, which includes mean-squared-error, adversarial loss, perceptual loss, and textural loss. Our experimental results demonstrate that 1) the proposed networks can produce MRI super-resolution images with good image quality and outperform other multi-contrast super-resolution methods in terms of structural similarity and peak signal-to-noise ratio; 2) combining multi-contrast information in a high-level feature space leads to a significantly improved result than a combination in the low-level pixel space; and 3) the progressive network produces a better super-resolution image quality than the non-progressive network, even if the original low-resolution images were highly down-sampled.

6 January 2020 in IEEE Transactions on Computational Imaging
Verified
Journal Article
Closed access
QLQing Lyu
Qing Lyu
HSHongming Shan
Hongming Shan
Ge WangGe Wang
Ge Wang
Magnetic resonance imaging (MRI) is a widely used medical imaging modality. However, due to the limitations in hardware, scan time, and throughput, it is often clinically challenging to obtain high-quality MR images. The super-resolution approach is potentially promising to improve MR image quality without any hardware upgrade. In this article, we propose an ensemble learning and deep learning framework for MR image super-resolution. In our study, we first enlarged low resolution images using five commonly used super-resolution algorithms and obtained differentially enlarged image datasets with complementary priors. Then, a generative adversarial network (GAN) is trained with each dataset to generate super-resolution MR images. Finally, another GAN is used for ensemble learning that synergizes the outputs of GANs into the final MR super-resolution images. According to our results, the ensemble learning results outperform any single GAN output component. Compared with some state-of-the-art deep learning-based super-resolution methods, our approach is advantageous in suppressing artifacts and keeping more image details.

21 December 2022 in IEEE Transactions on Medical Imaging
Verified
Journal Article
Closed access
Chuang NiuChuang Niu
Chuang Niu
MLMengzhou Li
Mengzhou Li
FFFENGLEI FAN
FENGLEI FAN
WWWeiwen Wu
Weiwen Wu
XGXiaodong Guo
Xiaodong Guo
Ge WangGe Wang
Ge Wang
Image denoising is a prerequisite for downstream tasks in many fields. Low-dose and photon-counting computed tomography (CT) denoising can optimize diagnostic performance at minimized radiation dose. Supervised deep denoising methods are popular but require paired clean or noisy samples that are often unavailable in practice. Limited by the independent noise assumption, current self-supervised denoising methods cannot process correlated noises as in CT images. Here we propose the first-of-its-kind similarity-based self-supervised deep denoising approach, referred to as Noise2Sim, that works in a nonlocal and nonlinear fashion to suppress not only independent but also correlated noises. Theoretically, Noise2Sim is asymptotically equivalent to supervised learning methods under mild conditions. Experimentally, Nosie2Sim recovers intrinsic features from noisy low-dose CT and photon-counting CT images as effectively as or even better than supervised learning methods on practical datasets visually, quantitatively and statistically. Noise2Sim is a general self-supervised denoising approach and has great potential in diverse applications.

30 July 2021 in IEEE Transactions on Medical Imaging
Verified
Journal Article
Closed access
QLQing Lyu
Qing Lyu
HSHongming Shan
Hongming Shan
YXYibin Xie
Yibin Xie
AKAlan C. Kwan
Alan C. Kwan
YOYuka Otaki
Yuka Otaki
Ge WangGe Wang
Ge Wang
Cine cardiac magnetic resonance imaging (MRI) is widely used for the diagnosis of cardiac diseases thanks to its ability to present cardiovascular features in excellent contrast. As compared to computed tomography (CT), MRI, however, requires a long scan time, which inevitably induces motion artifacts and causes patients' discomfort. Thus, there has been a strong clinical motivation to develop techniques to reduce both the scan time and motion artifacts. Given its successful applications in other medical imaging tasks such as MRI super-resolution and CT metal artifact reduction, deep learning is a promising approach for cardiac MRI motion artifact reduction. In this paper, we propose a novel recurrent generative adversarial network model for cardiac MRI motion artifact reduction. This model utilizes bi-directional convolutional long short-term memory (ConvLSTM) and multi-scale convolutions to improve the performance of the proposed network, in which bi-directional ConvLSTMs handle long-range temporal features while multi-scale convolutions gather both local and global features. We demonstrate a decent generalizability of the proposed method thanks to the novel architecture of our deep network that captures the essential relationship of cardiovascular dynamics. Indeed, our extensive experiments show that our method achieves better image quality for cine cardiac MRI images than existing state-of-the-art methods. In addition, our method can generate reliable missing intermediate frames based on their adjacent frames, improving the temporal resolution of cine cardiac MRI sequences.

11 February 2025 in Nature Communications
Verified
Journal Article
Open access
PDF file
Chuang NiuChuang Niu
Chuang Niu
QLQing Lyu
Qing Lyu
CCChristopher D. Carothers
Christopher D. Carothers
PKParisa Kaviani
Parisa Kaviani
JTJosh Tan
Josh Tan
Ge WangGe Wang
Ge Wang
Lung cancer screening (LCS) reduces mortality and involves vast multimodal data such as text, tables, and images. Fully mining such big data requires multitasking; otherwise, occult but important features may be overlooked, adversely affecting clinical management and healthcare quality. Here we propose a medical multimodal-multitask foundation model (M3FM) for three-dimensional low-dose computed tomography (CT) LCS. After curating a multimodal multitask dataset of 49 clinical data types, 163,725 chest CT series, and 17 tasks involved in LCS, we develop a scalable multimodal question-answering model architecture for synergistic multimodal multitasking. M3FM consistently outperforms the state-of-the-art models, improving lung cancer risk and cardiovascular disease mortality risk prediction by up to 20% and 10% respectively. M3FM processes multiscale high-dimensional images, handles various combinations of multimodal data, identifies informative data elements, and adapts to out-of-distribution tasks with minimal data. In this work, we show that M3FM advances various LCS tasks through large-scale multimodal and multitask learning.