Grouper is one of the favorite sea food resources in Southeast Asia. However, the outbreaks of the viral nervous necrosis (VNN) disease due to nervous necrosis virus (NNV) infection have caused mass mortality of grouper larvae. Many aqua-farms have suffered substantial financial loss due to the occurrence of VNN. To better understand the infection mechanism of NNV, we performed the transcriptome analysis of sevenband grouper brain tissue, the main target of NNV infection. After artificial NNV challenge, transcriptome of brain tissues of sevenband grouper was subjected to next generation sequencing (NGS) using an Illumina Hi-seq 2500 system. Both mRNAs from pooled samples of mock and NNV-infected sevenband grouper brains were sequenced. Clean reads of mock and NNV-infected samples were de novo assembled and obtained 104,348 unigenes. In addition, 628 differentially expressed genes (DEGs) in response to NNV infection were identified. This result could provide critical information not only for the identification of genes involved in NNV infection, but for the understanding of the response of sevenband groupers to NNV infection.

In 2021, a prominent increase in mortality was observed in juvenile and subadult cultured chum salmon (Oncorhynchus keta) on a mariculture farm in Jeollanam-do Province, South Korea. The affected fish displayed distinct symptoms: pale gills, petechial hemorrhages in the muscles, and white nodules on the kidneys. Infectious pancreatic necrosis virus (IPNV) was cultured from some fish samples using fish cell lines. Bacteria were isolated from various fish tissues using kidney disease medium-two (KDM-2) culture medium. By detecting and sequencing the 16S rRNA gene using DNA extracted from the kidneys of the infected fish via PCR, the isolated bacteria were identified as Renibacterium salmoninarum. Histopathological examination primarily focused on hematopoietic tissues of kidneys and revealed clear evidence of severe necrosis and granulomatous changes. Additionally, nuclei with peripherally displaced chromatin were abundant in the kidneys of affected fish. These findings suggest that mass mortality of chum salmon was caused by R. salmoninarum, which induced typical bacterial kidney disease (BKD) symptoms, without IPNV infection. This represents the first outbreak of BKD attributed to R. salmoninarum infection in farmed chum salmon in South Korea.