Three tick-borne encephalitis virus (TBEV) strains were isolated from Ixodes persulcatus ticks, and one was isolated from a shrew in the territory of eastern Siberia (Russia). The level of sequence identity compared to Neudoerfl (the European prototype strain) is 97.2 to 97.3%.

The Republic of Buryatia (RB) is located southeast of Lake Baikal and shares a long border with Mongolia. This region of Russia was rabies‐free from 1982 to 2010. The first outbreak of fox rabies in RB was identified in 2011, about 30 km from the Russian–Mongolian border. We assessed the possible pathways to further spread the ‘steppe’ phylogenetic lineage of the rabies virus near the northeastern limits of its known distribution. All rabies cases were located 30–210 km north of the Russia–Mongolia border, with a distance of up to 320 km from each other. Rabies has spread to the north across steppe landscapes and river valleys, with foxes being the main natural hosts of the infection. All RABV isolates from RB belong to the ‘steppe’ phylogenetic lineage, and three major phylogenic groups could be separated. Group 1 contains sequences from RB, Mongolia, China (Inner Mongolia), and bordering regions of Russia. Group 2 is formed by isolates from other regions of Eastern Siberia, which have no borders with RB and foreign countries. Group 3 contains samples from Western Siberia with endemic fox rabies since the 1950s. The most probable cause of fox rabies epizooty in the RB was multiple drift of the RABV across the Russian–Mongolian border. Our data show that after 2010, fox rabies affected new areas in Central Asia and extended to the north and northeast. Affected areas are similar to the Mongolian‐type steppes in their zoogeographical aspect. Closely related genetic lineages of RABV are circulating in RB, Mongolia and the nearest areas of China. International cooperation is necessary to prevent the spread of rabies in the bordering territories of these countries.

Ixodid ticks from different regions of the Baikal Region were examined for the presence of transmissive pathogens during 5 seasons (2013–2017). Frequency of occurrence of the revealed markers in...

There are three known subtypes of TBEV: Far Eastern, Siberian, and European. The European subtype of tick-borne encephalitis virus (TBEV-Eur) is prevalent