Krzysztof Niemczuk

Dr. Krzysztof Niemczuk


Research Focus & Metrics

Academic Career Length

25Years (2002-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 July 2016 in Emerging Infectious Diseases
Verified
Journal Article
Open access
KŚKrzysztof Śmietanka
Krzysztof Śmietanka
GWGrzegorz Woźniakowski
Grzegorz Woźniakowski
EKEdyta Kozak
Edyta Kozak
KNKrzysztof Niemczuk
Krzysztof Niemczuk
MFMagdalena Frączyk
Magdalena Frączyk
ZPZygmunt Pejsak
Zygmunt Pejsak
In Poland, African swine fever (ASF) emerged in February 2014; by August 2015, the virus had been detected in >130 wild boar and in pigs in 3 backyard holdings. We evaluated ASF spread in Poland during these 18 months. Phylogenetic analysis indicated repeated incursions of genetically distinct ASF viruses of genotype II; the number of cases positively correlated with the number of wild boar; and disease spread was very slow. More cases were reported during summer than autumn. The 18-month prevalence of ASF in areas under various animal movement restrictions was 18.6% among wild boar found dead or killed by vehicles and only 0.2% in hunted wild boar. Repeated introductions of the virus into the country, the primary role of wild boar in virus maintenance, and the slow spread of the disease indicate a need for enhanced biosecurity at pig holdings and continuous and intensive surveillance for fast detection of ASF.

1 December 2014 in Polish Journal of Veterinary Sciences
Verified
Journal Article
Open access
PDF file
ZPZ. Pejsak
Z. Pejsak
MTM. Truszczyński
M. Truszczyński
KNKrzysztof Niemczuk
Krzysztof Niemczuk
EKE. Kozak
E. Kozak
IMI. Markowska-Daniel
I. Markowska-Daniel
The purpose of this paper is to provide characteristics of the spread of African Swine Fever (ASF) in Poland from February to August, 2014. The samples from dead wild boar and domestic pigs were submitted to the National Veterinary Research Institute, National Reference Laboratory for ASF in Pulawy, Poland, for testing by PCR and ELISA methods. In the studied period, fourteen cases of ASF in wild boar and two outbreaks in backyard pigs were confirmed. In addition to the results of laboratory tests performed in 2014, the article describes the ASF surveillance programme in wild boar and pigs in Poland carried out in 2011-2013. The spread of ASF in Poland is compared with the epidemiological situation in Lithuania, Latvia, Belarus and the Russian Federation.

26 October 2015 in Archives of Virology
Verified
Journal Article
Open access
PDF file
Grzegorz WoźniakowskiGrzegorz Woźniakowski
Grzegorz Woźniakowski
EKEdyta Kozak
Edyta Kozak
AKAndrzej Kowalczyk
Andrzej Kowalczyk
MŁMagdalena Łyjak
Magdalena Łyjak
Małgorzata Pomorska-MólMałgorzata Pomorska-Mól
Małgorzata Pomorska-Mól
ZPZygmunt Pejsak
Zygmunt Pejsak
African swine fever virus (ASFV) was detected in wild boar in eastern Poland in early 2014. So far, 65 cases of ASFV infection in wild boar have been recognised. The methods used for ASFV detection included highly specific real-time PCR with a universal probe library (UPL), enzyme-linked immunosorbent assay (ELISA), and an immunoperoxidase test (IPT) for identification of anti-ASFV antibodies. The positive ASF cases were located near the border with Belarus in Sokółka and Białystok counties. Some of the countermeasures for disease prevention include early ASF diagnosis by ASFV DNA identification as well as detection of specific antibodies by systematic screening. The aim of this study was to assess the current ASF status in a Polish population of wild boar during the last two years (2014-2015).

28 March 2017 in PLOS ONE
Verified
Journal Article
Open access
PDF file
MSMonika Szymańska-Czerwińska
Monika Szymańska-Czerwińska
AMAgata Mitura
Agata Mitura
KNKrzysztof Niemczuk
Krzysztof Niemczuk
KZKinga Zaręba-Marchewka
Kinga Zaręba-Marchewka
AJAgnieszka Jodełko
Agnieszka Jodełko
CSChristiane Schnee
Christiane Schnee
Wild birds are considered as a reservoir for avian chlamydiosis posing a potential infectious threat to domestic poultry and humans. Analysis of 894 cloacal or fecal swabs from free-living birds in Poland revealed an overall Chlamydiaceae prevalence of 14.8% (n = 132) with the highest prevalence noted in Anatidae (19.7%) and Corvidae (13.4%). Further testing conducted with species-specific real-time PCR showed that 65 samples (49.2%) were positive for C. psittaci whereas only one was positive for C. avium. To classify the non-identified chlamydial agents and to genotype the C. psittaci and C. avium-positive samples, specimens were subjected to ompA-PCR and sequencing (n = 83). The ompA-based NJ dendrogram revealed that only 23 out of 83 sequences were assigned to C. psittaci, in particular to four clades representing the previously described C. psittaci genotypes B, C, Mat116 and 1V. Whereas the 59 remaining sequences were assigned to two new clades named G1 and G2, each one including sequences recently obtained from chlamydiae detected in Swedish wetland birds. G1 (18 samples from Anatidae and Rallidae) grouped closely together with genotype 1V and in relative proximity to several C. abortus isolates, and G2 (41 samples from Anatidae and Corvidae) grouped closely to C. psittaci strains of the classical ABE cluster, Matt116 and M56. Finally, deep molecular analysis of four representative isolates of genotypes 1V, G1 and G2 based on 16S rRNA, IGS and partial 23S rRNA sequences as well as MLST clearly classify these isolates within the C. abortus species. Consequently, we propose an expansion of the C. abortus species to include not only the classical isolates of mammalian origin, but also avian isolates so far referred to as atypical C. psittaci or C. psittaci/C. abortus intermediates.

14 March 2019 in Scientific Reports
Verified
Journal Article
Open access
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NMNatalia Mazur-Panasiuk
Natalia Mazur-Panasiuk
Grzegorz WoźniakowskiGrzegorz Woźniakowski
Grzegorz Woźniakowski
KNKrzysztof Niemczuk
Krzysztof Niemczuk
African swine fever (ASF) is a contagious, notifiable viral disease, which is considered a significant threat not only for European, but also for worldwide pork production, since recently the virus emerged within numerous Chinese pig herds. The disease was introduced in Poland in 2014 and up to the end of 2018, 213 outbreaks in pigs and 3347 cases in wild boars have been reported. The presented study describes the whole genome sequencing of seven Polish isolates, collected between 2016 and 2017, using next generation sequencing (NGS) technology. The complete, genomic sequences of these isolates were compared against five other closely related ASFV genomes, annotated in the NCBI database. The obtained sequences were from 189.393 to 189.405 bp long and encoded 187–190 open reading frames (ORFs). The isolates were grouped within genotype II and showed 99.941 to 99.956% nucleotide identity to the Georgia 2007/1 reference strain.

1 September 2016 in Veterinary Microbiology
Verified
Journal Article
Closed access
MFMagdalena Frączyk
Magdalena Frączyk
Grzegorz WoźniakowskiGrzegorz Woźniakowski
Grzegorz Woźniakowski
AKAndrzej Kowalczyk
Andrzej Kowalczyk
LBLukasz Bocian
Lukasz Bocian
EKEdyta Kozak
Edyta Kozak
ZPZygmunt Pejsak
Zygmunt Pejsak