Fredrick ONYNGO Ogutu

Dr. Fredrick ONYNGO Ogutu

orcid

Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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27 August 2020 in Critical Reviews in Food Science and Nutrition
Verified
Journal Article
Closed access
BBBeatrice J. Birgen
Beatrice J. Birgen
LNLucy G. Njue
Lucy G. Njue
DKDasel Kaindi
Dasel Kaindi
FOFredrick ONYNGO Ogutu
Fredrick ONYNGO Ogutu
JOJoshua Omabaka
Joshua Omabaka
Prevalent risks in meat value-chains of sub-Saharan African (SSA) countries are increasingly attributed to microbial rather than chemical hazards. Resource constraints and lack of capacity has limited the utilization of risk assessment tools in the instituting of food controls to mitigate the risks. The review sought to bring to light the focus of risk assessment studies in SSA while generating evidence of feasible options to further the contribution of this component in risk mitigation. The informal street vending sector emerges as a priority in the meat value chain with a vendor population that are unwilling to abandon it. Campylobacter and Staphylococcus aureus are prevalent risks that have bedeviled this sector. However, limited risk assessment studies with capacity to inform proper food controls for the sector have been done. Evidence in place indicate that the incorporation of qualitative aspects in quantitative approaches serve as less-costly and effective ways of generating risk estimates. Limitations of capacity and gaps in epidemiological data are also circumvented. Considering that the street-vending sector is robust and its dynamics of operation are not fully in the picture of policy actors; incorporation of a participatory approach that combines qualitative and quantitative aspects of risk assessment is highly recommended.

9 December 2024 in Viruses
Verified
Journal Article
Open access
PDF file
BOBoniface Oure Obong'o
Boniface Oure Obong'o
FOFredrick ONYNGO Ogutu
Fredrick ONYNGO Ogutu
SHShauna Kathleen Hurley
Shauna Kathleen Hurley
GOGetrude Okiko
Getrude Okiko
Jennifer MahonyJennifer Mahony
Jennifer Mahony
Access to safe water and food is a critical issue in sub-Saharan Africa, where microbial contamination poses significant health risks. Conventional water treatment and food preservation methods have limitations in addressing water safety, particularly for antibiotic-resistant bacteria and other pathogenic microorganisms. This review explores the potential application of bacteriophages as an innovative solution for water treatment and food safety in the region. Bacteriophages specifically infect bacteria and offer a targeted approach to reducing bacterial load, including multidrug-resistant strains, without the drawbacks of chemical disinfectants. This review also highlights the advantages of phage bioremediation, including its specificity, adaptability, and minimal environmental impact. It also discusses various case studies demonstrating its efficacy in different water systems. Additionally, we underscore the need for further research and the development of region-specific phage applications to improve water quality and public health outcomes in sub-Saharan Africa. By integrating bacteriophage strategies into water treatment and food production, the region can address critical microbial threats, mitigate the spread of antimicrobial resistance, and advance global efforts toward ensuring safe water for all.

28 September 2022 in Preprints.org
Verified
Preprint
Open access
PDF file
RMRichard Magwanga
Richard Magwanga
BOBenson Onyango
Benson Onyango
AOAlfred Ochieng
Alfred Ochieng
SAShehu Shagari Awandu
Shehu Shagari Awandu
PWPamela Were
Pamela Were
BEBenson Estambale
Benson Estambale
Coronavirus is a disease caused by a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) which emerged as a global pandemic in 2019 from Wuhan, China. Since its emergence, it has caused immense suffering to human life, 6.27 million lives have been lost, movement curtailed and social dynamics disrupted. The golden standard for getting samples for SARS-CoV-2 detection is through oral- nasopharyngeal swab, this method of sample collection is invasive and uncomfortable, thus stigmatized the general population, and thereby impeded the progress of controlling the spread through mass testing. Being a contact disease, mechanisms to encourage mass testing is key to reduce the spread. This study thus developed a complimentary sample type to test for SARS-CoV-2, the use of human feces. Fecal samples were collected from 100 asym-symptomatic individuals suspected to be infected with COVID-19, virus RNA was then extracted and profiled through Real Time Polymerase Chain Reaction (RT-qPCR). The antigen rapid diagnostic test revealed high positivity rate of 44%, but the real time polymerase chain reaction results on nasopharyngeal and fecal samples revealed a significant variation, high number of the patients tested positive with stool samples compared to the nasopharyngeal swabs, with 43 and 37%, respectively. SARS-CoV-2 virus was detected in both symptomatic and asymptomatic individuals; however, the symptomatic registered a higher positivity of 25% compared to 20% among the asymptomatic patients. Vaccination only lowered the risk of infection, fully and partially vaccinated lowered the infection level to 10% compared to 20% among the unvaccinated. Finally, gender parity in relation to COVID19 was evaluated, more females (56%) compared to males were recruited in this study, out of which (20; 43.4%) were positive, and 26 (56.6%) were negative based on fecal RT-qPCR outcomes. Based on the outcome of this study, rapid diagnostic test (Ag-RDT) however cheap and or fast does not provide accurate information, moreover, the virus does not stay longer within the Oro-nasopharyngeal region, thus the invalid or negative results, thus use of feces should be adopted as a confirmatory test to ascertain the COVID19 status of an individual.

12 December 2024 in Turkish Journal of Agriculture - Food Science and Technology
Verified
Journal Article
Closed access
GOGetrude Okiko
Getrude Okiko
ISIvan Sugrue
Ivan Sugrue
FOFredrick ONYNGO Ogutu
Fredrick ONYNGO Ogutu
RRR. Paul Ross
R. Paul Ross
Spoilage of pasteurized milk is mainly caused by the presence of organisms that either survive pasteurization (psychrotolerant spore-formers) or re-contaminate milk in the processing environment (post-pasteurisation contaminants). Pasteurization of bovine milk by heat treating at 72°C for 15-30 seconds ensures milk quality without impairing its organoleptic and nutritional status and extends shelf life to 12-14 days at refrigeration temperatures. Nisin A is a class I bacteriocin known to inhibit gram positive bacteria and approved by the European Food and Safety Authority as a food preservative. It is commercially available as Nisaplin®, which contains a concentration of 2.5% w/w of nisin. This study examined the effect of Nisaplin® at different concentrations on spoilage of refrigerated commercial whole pasteurized milk over a period of 59 days. At a high concentration of 4 mgml-1, Nisaplin® reduced the total bacterial count below the limit of detection in the milk, and inhibition was visible for at least 14 days at 4°C. Previously isolated milk spoilage bacteria were identified using 16s rRNA gene sequencing and utilised as target indicators for bacteriocin production. Lactobacillus delbrueckii ssp. bulgaricus LMG6901, Microbacterium lacticum, and Pseudomonas aeruginosa were utilised as indicator strains in a screen of milk spoilage organisms for bacteriocin production. This resulted in identifying the putative bacteriocin producer Carnobacterium divergens, a lactic acid bacterium active against L. bulgaricus. The study concludes that Nisaplin® is effective in the reduction of microbial load and its effectiveness could be increased when combined with other preservative methods thus forming an extra hurdle in the milk.