Litter decomposition is important for understanding the effects of habitat on nutrient cycling. In this study, we investigated the decomposition characteristics, decomposition variability, and regulatory factors restricting the decomposition rates of leaf litter in three different habitats: a flood disturbance habitat, an arid habitat, and a high-salinity habitat. The litter decomposition rates of the habitats decreased in the following order: flood disturbance habit > arid habitat > high-salinity habitat. The organic carbon, total nitrogen, and lignin residues of the litter during the decomposition period were highest in the high-salinity habitat. The litter quality was the main regulator of the release of phosphorus and cellulose residues, which exhibited different release processes and patterns in these three habitats. The litter decomposition coefficient was negatively correlated with litter carbon residue in the flood disturbance habitats, the lignocellulose index in the arid habitats, and soil urease in the high-salinity habitats. It was positively correlated with the lignocellulose index in flood disturbance habitats and litter carbon residue in high-salinity habitats. The litter quality in the flood disturbance area played a significant role in litter decomposition, while environmental quality and litter quality were the dominant factors under arid and high-salt conditions. Litter quality in the flood disturbance area played a significant role in litter decomposition, while both environmental quality and litter quality were the dominant factors under arid and salt conditions.