Yangdong Ye

Dr. Yangdong Ye


Research Focus & Metrics

Academic Career Length

3Years (2024-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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Journal Article
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YYYangdong Ye
Yangdong Ye
SXShangye Xiong
Shangye Xiong
XGXin Guan
Xin Guan
TTTianxin Tang
Tianxin Tang
ZZZhihong Zhu
Zhihong Zhu
SZShuai Zhang
Shuai Zhang
This review provides a comprehensive overview of the current understanding of rice resistance to the brown planthopper (BPH), a major pest that poses significant threats to rice production through direct feeding damage and by transmitting viruses such as Rice grassy stunt virus (RGSV) and Rice ragged stunt virus (RRSV). We highlight the emergence of various BPH biotypes that have overcome specific resistance genes in rice. Advances in genetic mapping and cloning have identified 17 BPH resistance genes, classified into typical R genes encoding nucleotide-binding leucine-rich repeat (NLR) proteins and atypical R genes such as lectin receptor kinases and proteins affecting cell wall composition. The molecular mechanisms of these genes involve the activation of plant defense pathways mediated by phytohormones like jasmonic acid (JA), salicylic acid (SA), and ethylene, as well as the production of defensive metabolites. We also examine the complex interactions between BPH salivary proteins and rice defense responses, noting how salivary effectors can both suppress and trigger plant immunity. The development and improvement of BPH-resistant rice varieties through conventional breeding and molecular marker-assisted selection are discussed, including strategies like gene pyramiding to enhance resistance durability. Finally, we outline the challenges and future directions in breeding for durable BPH resistance, emphasizing the need for continued research on resistance mechanisms and the development of rice varieties with broad-spectrum and long-lasting resistance.

25 September 2026 in Biology
Verified
Journal Article
Open access
PDF file
ZKZ K
Z K
JLJiao Lin
Jiao Lin
XWXin Wei
Xin Wei
ZZZipiao Zheng
Zipiao Zheng
LYLiyun Yang
Liyun Yang
Yang JiaoYang Jiao
Yang Jiao
The glycosyltransferase 4 (GT4) family plays essential roles in plant cell wall biosynthesis, glycolipid metabolism, and secondary metabolite glycosylation, yet its characterization in cotton remains scarce. Here, we performed a genome-wide identification of GT4 genes in four cotton species using comprehensive bioinformatics approaches, and systematically analyzed their conserved motifs, gene structures, chromosomal distributions, phylogeny, and selection pressures. A total of 49 GT4 members were identified, including seven genes in G. arboreum (A2), nine genes in G. raimondii (D5), 16 genes in G. hirsutum (AD1), and 17 genes in G. barbadense (AD2). Phylogenetic analysis classified them into four subfamilies. Chromosomal mapping revealed uneven distribution and various duplication events. Promoter cis-element analysis indicated enrichment of light-, phytohormon-, and stress-responsive regulatory elements. Selection pressure analysis indicated predominant purifying selection among homologous pairs. Expression profiling across multiple tissues, fiber developmental stages, and four abiotic stresses (cold, drought, salt, and heat) identified GhGT4_10 and GhGT4_2 as stress-responsive candidate genes; GhGT4_10 showed the most pronounced induction across the tested stresses, and both were drought-responsive by qRT-PCR. WGCNA under drought stress showed that the MEgreen module was most positively correlated with the 12 h post-treatment time point, and this module was significantly enriched in genes annotated to chloroplast components, photoresponse pathways, ribosomal machinery, and glyoxylate/dicarboxylate metabolism. Subcellular localization showed that GhGT4_2 localizes to chloroplasts, consistent with its predicted localization; this observation supports a possible chloroplast-associated role but does not establish its function or involvement in a specific pathway. In fuzz development analysis, the MEturquoise module was highly correlated with fuzz phenotype, and a co-expression network centered on GhGT4_15 identified 503 network-connected genes enriched in nucleocytoplasmic transport, phagosome, and spliceosome pathways. These enrichment results suggest a hypothesis that GhGT4_15 may be associated with these pathways. qRT-PCR showed that GhGT4_2 and GhGT4_10 were drought-responsive, whereas GhGT4_7 and GhGT4_15 were associated with fuzz development and represent candidate regulators, including possible negative regulation, pending functional validation. Collectively, this study characterizes the structural and expression features of the cotton GT4 family and provides candidate genes for molecular breeding targeting abiotic stress resistance and fiber trait improvement; functional validation is needed to establish causal roles.