Brian E Applegate

Dr. Brian E Applegate

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Research Focus & Metrics

Academic Career Length

20Years (2007-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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3 March 2015 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Closed access
PDF file
HLHee Yoon Lee
Hee Yoon Lee
PRPatrick D. Raphael
Patrick D. Raphael
JPJesung Park
Jesung Park
AEAudrey K. Ellerbee
Audrey K. Ellerbee
BABrian E Applegate
Brian E Applegate
JOJohn Oghalai
John Oghalai
Significance: The membranes within the cochlea vibrate in response to sound. However, measuring these vibrations to study the sense of hearing has been a technological challenge because invasive techniques have been required. Herein, we describe a new technique capable of depth-resolved displacement measurements in 3D space with picometer sensitivity within the unopened mouse cochlea. We used this technique to make, to our knowledge, the first measurements of the tectorial membrane, the structure that overlies the sensory hair cell stereociliary bundles, within a healthy cochlea. We found that the tectorial membrane sustains traveling wave propagation differently than the more commonly measured basilar membrane. This finding provides a clearer understanding of the mechanical stimulus at the level of the inner hair cell responsible for non-linear sound encoding.

16 January 2019 in Journal of Neuroscience
Verified
Journal Article
Open access
PDF file
JDJames B. Dewey
James B. Dewey
BABrian E Applegate
Brian E Applegate
JOJohn Oghalai
John Oghalai
Mammalian hearing sensitivity and frequency selectivity depend on a mechanical amplification process mediated by outer hair cells (OHCs). OHCs are situated within the organ of Corti atop the basilar membrane (BM), which supports sound-evoked traveling waves. It is well established that OHCs generate force to selectively amplify BM traveling waves where they peak, and that amplification accumulates from one location to the next over this narrow cochlear region. However, recent measurements demonstrate that traveling waves along the apical surface of the organ of Corti, the reticular lamina (RL), are amplified over a much broader region. Whether OHC forces accumulate along the length of the RL traveling wave to provide a form of “global” cochlear amplification is unclear. Here we examined the spatial accumulation of RL amplification. In mice of either sex, we used tones to suppress amplification from different cochlear regions and examined the effect on RL vibrations near and far from the traveling-wave peak. We found that although OHC forces amplify the entire RL traveling wave, amplification only accumulates near the peak, over the same region where BM motion is amplified. This contradicts the notion that RL motion is involved in a global amplification mechanism and reveals that the mechanical properties of the BM and organ of Corti tune how OHC forces accumulate spatially. Restricting the spatial buildup of amplification enhances frequency selectivity by sharpening the peaks of cochlear traveling waves and constrains the number of OHCs responsible for mechanical sensitivity at each location.SIGNIFICANCE STATEMENTOuter hair cells generate force to amplify traveling waves within the mammalian cochlea. This force generation is critical to the ability to detect and discriminate sounds. Nevertheless, how these forces couple to the motions of the surrounding structures and integrate along the cochlear length remains poorly understood. Here we demonstrate that outer hair cell-generated forces amplify traveling-wave motion on the organ of Corti throughout the wave's extent, but that these forces only accumulate longitudinally over a region near the wave's peak. The longitudinal coupling of outer hair cell-generated forces is therefore spatially tuned, likely by the mechanical properties of the basilar membrane and organ of Corti. Our findings provide new insight into the mechanical processes that underlie sensitive hearing.

22 October 2021 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Closed access
PDF file
JDJames B. Dewey
James B. Dewey
AAAlessandro Altoe
Alessandro Altoe
CSChristopher A. Shera
Christopher A. Shera
BABrian E Applegate
Brian E Applegate
JOJohn Oghalai
John Oghalai
Significance: The remarkable high-frequency sensitivity of mammalian hearing depends on the amplification of sound-evoked cochlear vibrations by outer hair cells. One way that outer hair cells are proposed to generate amplifying forces is through voltage-driven changes in cell length. However, it remains unclear whether this electromotility can work fast enough in vivo to provide amplification at the necessary frequencies. Here, we show that sound elicits motions within the living mouse cochlea that are fully consistent with electromotility. These motions are large relative to the motion of the underlying cochlear partition, including at high frequencies. The data therefore suggest that electromotility can indeed provide high-speed amplification in vivo.

9 June 2022 in Optica
Verified
Journal Article
Closed access
GBGregory Berglund
Gregory Berglund
AWAnna Wisniowiecki
Anna Wisniowiecki
JGJohn Gawedzinski
John Gawedzinski
BABrian E Applegate
Brian E Applegate
TTTomasz S. Tkaczyk
Tomasz S. Tkaczyk
The ambition of this review is to provide an up-to-date synopsis of the state of 3D printing technology for optical and photonic components, to gauge technological advances, and to discuss future opportunities. While a range of approaches have been developed and some have been commercialized, no single approach can yet simultaneously achieve small detail and low roughness at large print volumes and speed using multiple materials. Instead, each approach occupies a niche where the components/structures that can be created fit within a relatively narrow range of geometries with limited material choices. For instance, the common Fused Deposition Modeling (FDM) approach is capable of large print volumes at relatively high speeds but lacks the resolution needed for small detail ( > 100 µ m ) with low roughness ( > 9 µ m ). At the other end of the spectrum, two-photon polymerization can achieve roughness ( < 15 n m ) and detail ( < 140 n m ) comparable to commercial molded and polished optics. However, the practical achievable print volume and speed are orders of magnitude smaller and slower than the FDM approach. Herein, we discuss the current state-of-the-art 3D printing approaches, noting the capability of each approach and prognosticate on future innovations that could close the gaps in performance.

16 July 2010 in Biomedical Optics Express
Verified
Journal Article
Open access
PDF file
JPJesung Park
Jesung Park
JJJavier A. Jo
Javier A. Jo
SSSebina Shrestha
Sebina Shrestha
PPParitosh Pande
Paritosh Pande
QWQiujie Wan
Qiujie Wan
BABrian E Applegate
Brian E Applegate
Most pathological conditions elicit changes in the tissue optical response that may be interrogated by one or more optical imaging modalities. Any single modality typically only furnishes an incomplete picture of the tissue optical response, hence an approach that integrates complementary optical imaging modalities is needed for a more comprehensive non-destructive and minimally-invasive tissue characterization. We have developed a dual-modality system, incorporating optical coherence tomography (OCT) and fluorescence lifetime imaging microscopy (FLIM), that is capable of simultaneously characterizing the 3-D tissue morphology and its biochemical composition. The Fourier domain OCT subsystem, at an 830 nm center wavelength, provided high-resolution morphological volumetric tissue images with an axial and lateral resolution of 7.3 and 13.4 µm, respectively. The multispectral FLIM subsystem, based on a direct pulse-recording approach (upon 355 nm laser excitation), provided two-dimensional superficial maps of the tissue autofluorescence intensity and lifetime at three customizable emission bands with 100 µm lateral resolution. Both subsystems share the same excitation/illumination optical path and are simultaneously raster scanned on the sample to generate coregistered OCT volumes and FLIM images. The developed OCT/FLIM system was capable of a maximum A-line rate of 59 KHz for OCT and a pixel rate of up to 30 KHz for FLIM. The dual-modality system was validated with standard fluorophore solutions and subsequently applied to the characterization of two biological tissue types: postmortem human coronary atherosclerotic plaques, and in vivo normal and cancerous hamster cheek pouch epithelial tissue.

2 August 2019 in Biomedical Optics Express
Verified
Journal Article
Closed access
WKWihan Kim
Wihan Kim
SKSangmin Kim
Sangmin Kim
SHShuning Huang
Shuning Huang
JOJohn S. Oghalai
John S. Oghalai
BABrian E Applegate
Brian E Applegate
We have developed a highly phase stable optical coherence tomography and vibrometry system that attaches directly to the accessory area of a surgical microscope common to both the otology clinic and operating room. Careful attention to minimizing sources of phase noise has enabled a system capable of measuring vibrations of the middle ear with a sensitivity of < 5 pm in an awake human patient. The system is shown to be capable of collecting a wide range of information on the morphology and function of the ear in live subjects, including frequency tuning curves below the hearing threshold, maps of tympanic membrane vibrational modes and thickness, and measures of distortion products due to the nonlinearities in the cochlear amplifier.