Dorji Phurbu

Dr. Dorji Phurbu


Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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15 December 2024 in Studies in Mycology
Verified
Journal Article
Open access
PRP. Razaghi
P. Razaghi
MRM. Raza
M. Raza
SHS.L. Han
S.L. Han
ZMZ.Y. Ma
Z.Y. Ma
LCL. Cai
L. Cai
Fang LiuFang Liu
Fang Liu
Sporocadaceae is a species-rich and cosmopolitan fungal family including species of plant pathogens, endophytes or saprobes, and parasites of humans and animals. The taxonomy of Sporocadaceae has recently been revised using a polyphasic approach. However, much remains unknown about the diversity of species and their host associations. A collection of 488 strains, mostly from China and associated with 129 host plant species, was studied based on morphological comparisons and multi-locus (LSU, ITS, tef-1α , tub2 , and rpb2 ) phylogenies. Our results revealed that they belonged to 86 species, one new genus ( Cavernicola gen. nov .) and seven known genera, including Discosia , Monochaetia , Neopestalotiopsis , Pestalotiopsis, Seimatosporium , Seiridium and Sporocadus . Of these, 43 new species and three new combinations ( Dis . kaki , Mon . bulbophylli , and Neo . keteleeriae ) are proposed in this paper. In addition, Neo. vaccinii , Pes. kaki and Pes. nanjingensis are synonymised under Neo. hispanica , Pes. menhaiensis and Pes. sichuanensis , respectively. We also corrected seven problematic sequences of type materials of previously published species, namely Neo . iranensis ( tef-1α , ITS, tub2 ), Pes . jesteri ( tef-1α ), Pes . photinicola (ITS, tub2 ) and Pes . yunnanensis (ITS). Based on this study, Pestalotiopsis and Neopestalotiopsis are the most commonly detected genera within the Sporocadaceae family, associated with 84 and 70 plant species, respectively. Furthermore, considering the importance of Sporocadaceae and the fact that commonly used loci provide little valid information for species delimitation in this family, especially for Neopestalotiopsis and Pestalotiopsis , we initiated a phylogenomic project in this study. It will not only contribute to the knowledge of species boundaries but will also provide an important basis for evolutionary studies and research on secondary metabolites in Sporocadaceae .

1 July 2021 in Food Science and Human Wellness
Verified
Journal Article
Open access
LSLi Sun
Li Sun
BLBao Li
Bao Li
DPDorji Phurbu
Dorji Phurbu
SQShanshan Qiao
Shanshan Qiao
SSShanshan Sun
Shanshan Sun
Hongwei LiuHongwei Liu
Hongwei Liu

19 July 2024 in Journal of Fungi
Verified
Journal Article
Open access
PDF file
XHXixi Han
Xixi Han
DPDorji Phurbu
Dorji Phurbu
GMGuo-Fei Ma
Guo-Fei Ma
YLYou-Zhi Li
You-Zhi Li
YMYu-Jiao Mei
Yu-Jiao Mei
BCBin Cao
Bin Cao
Based on phylogenetic analysis, Candolleomyces (Psathyrellaceae, Agaricales) was established with Psathyrella candolleana as the type species. The basidiomes range from small to large and are typically terrestrial, lignicolous, and rarely fimicolous. We analysed the Candolleomyces species collected during five years in China, and based on morphological and molecular data (nrITS, nrLSU, and tef-1α), we propose seven new Candolleomyces species viz. C. brevisporus, C. gyirongicus, C. lignicola, C. luridus, C. shennongdingicus, C. shennongjianus, and C. sichuanicus. Full descriptions, colour photographs, illustrations, phylogenetic analyses results, and comparisons with related Candolleomyces species of the new taxa are provided. This study enriches the species diversity of Candolleomyces in China.

10 December 2017 in Molecules
Verified
Journal Article
Open access
PDF file
SCShu-Xiao Chen
Shu-Xiao Chen
KLKeke Li
Keke Li
DPDorji Phurbu
Dorji Phurbu
SJSi-Ping Jiang
Si-Ping Jiang
BCBin Chen
Bin Chen
XGXiaojie Gong
Xiaojie Gong
Ultrasound-assisted extraction (UAE), using petroleum ether as the solvent, was systematically applied to extract main macamides and macaenes from Maca hypocotyls. Extraction yield was related with four variables, including ratio of solution to solid, extraction temperature, extraction time, and extraction power. On the basis of response surface methodology (RSM), the optimal conditions were determined to be the ratio of solution to solid as 10:1 (mL/g), the extraction temperature of 40 °C, the extraction time of 30 min, and the extraction power of 200 W. Based on the optimal extraction method of UAE, the total contents of ten main macamides and two main macaenes of Maca cultivated in twenty different areas of Tibet were analyzed by HPLC and UHPLC-ESI-Q-TOF-MS/MS. This study indicated that UAE was able to effectively extract macamides alkaloids from Maca hypocotyls. Quantitative analysis showed that geographical origins, not ecotypes, played a more important role on the accumulation of active macamides in Maca.

15 October 2024 in Journal of Fungi
Verified
Journal Article
Open access
PDF file
PZPeng Zhao
Peng Zhao
ZFZhipeng Feng
Zhipeng Feng
Lei CaiLei Cai
Lei Cai
DPDorji Phurbu
Dorji Phurbu
WDWeijun Duan
Weijun Duan
Fang LiuFang Liu
Fang Liu
Setophoma terrestris is an important phytopathogenic fungus listed by China as a harmful fungus subject to phytosanitary import control. This pathogen is a threat to a wide range of plants, particularly as the causal agent of onion pink root rot, one of the most severe diseases of onions. In order to provide rapid identification and early warning of S. terrestris and prevent its spread, we have developed a rapid, accurate, and visually intuitive diagnostic assay for this pathogen, by utilizing recombinase polymerase amplification (RPA), coupled with CRISPR/Cas12a cleavage and fluorescence-based detection systems or paper-based lateral flow strips. The developed RPA-CRISPR/Cas12a assay exhibited remarkable specificity for the detection of S. terrestris. Moreover, this protocol can detect the pathogen at a sensitivity level of 0.01 pg/μL, which significantly outperforms the 1 pg/μL sensitivity achieved by the existing qPCR-based detection method. The entire diagnostic procedure, including DNA extraction, the RPA reaction, the Cas12a cleavage, and the result interpretation, can be accomplished in 40 min. Furthermore, the successful application of the assay in infected plant samples highlighted its potential for rapid and accurate pathogen detection in agricultural settings. In summary, this RPA-CRISPR/Cas12a diagnostic method offers a potentially valuable technological solution for quarantine and disease management.

3 April 2024 in Mycology
Verified
Journal Article
Open access
DPDorji Phurbu
Dorji Phurbu
JHJun-En Huang
Jun-En Huang
SSShuang Song
Shuang Song
ZNZhen Ni
Zhen Ni
XZXin Zhou
Xin Zhou
Fang LiuFang Liu
Fang Liu
The combination of low temperatures, oligotrophic conditions, high altitude, and varying salinity in Tibetan Plateau lakes endows them with a wealth of distinctive fungal resources. This study aimed to investigate the diversity of culturable fungi in sediment and water samples collected from six lakes located on the Tibetan Plateau at elevations above 4,500 m. A total of 843 fungal strains were isolated by dilution plate method using four different media. Initial ITS analyses revealed that they belong to 156 species across 83 genera, spanning 50 families, 26 orders, 12 classes, and 6 phyla. Further morphological and multi-locus phylogenetic analyses were conducted, resulting in the formal descriptions of a new genus, Xizangia, and seven new species, including Alternaria xizangensis, Emericellopsis ovoidea, Myceliophthora xizangica, Preussia cylindricalis, Preussia sedimenticola, Pseudeurotium sedimenticola, and Xizangia sedimenticola. This research provides insights into the biodiversity of culturable fungi in the unique and extreme ecosystem, shedding light on the potential discovery of novel species and genera.