Daniel CL Linhares

Prof. Dr. Daniel CL Linhares

orcid

Research Focus & Metrics

Academic Career Length

12Years (2015-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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16 October 2019 in PLOS ONE
Verified
Journal Article
Open access
PDF file
GTGiovani Trevisan
Giovani Trevisan
LLLeticia C M Linhares
Leticia C M Linhares
BCBret Crim
Bret Crim
PDPoonam Dubey
Poonam Dubey
KSKent J Schwartz
Kent J Schwartz
DLDaniel CL Linhares
Daniel CL Linhares
This project investigates the macroepidemiological aspects of porcine reproductive and respiratory syndrome virus (PRRSV) RNA detection by veterinary diagnostic laboratories (VDLs) for the period 2007 through 2018. Standardized submission data and PRRSV real-time reverse-transcriptase polymerase chain reaction (RT-qPCR) test results from porcine samples were retrieved from four VDLs representing 95% of all swine samples tested in NAHLN laboratories in the US. Anonymized data were retrieved and organized at the case level using SAS (SAS® Version 9.4, SAS® Institute, Inc., Cary, NC) with the use of PROC DATA, PROC MERGE, and PROC SQL scripts. The final aggregated and anonymized dataset comprised of 547,873 unique cases was uploaded to Power Business Intelligence—Power BI® (Microsoft Corporation, Redmond, Washington) to construct dynamic charts. The number of cases tested for PRRSV doubled from 2010 to 2018, with that increase mainly driven by samples typically used for monitoring purposes rather than diagnosis of disease. Apparent seasonal trends for the frequency of PRRSV detection were consistently observed with a higher percentage of positive cases occurring during fall or winter months and lower during summer months, perhaps due to increased testing associated with well-known seasonal occurrence of swine respiratory disease. PRRSV type 2, also known as North American genotype, accounted for 94.76% of all positive cases and was distributed across the US. PRRSV type 1, also known as European genotype, was geographically restricted and accounted for 2.15% of all positive cases. Co-detection of both strains accounted for 3.09% of the positive cases. Both oral fluid and processing fluid samples, had a rapid increase in the number of submissions soon after they were described in 2008 and 2017, respectively, suggesting rapid adoption of these specimens by the US swine industry for PRRSV monitoring in swine populations. As part of this project, a bio-informatics tool defined as Swine Disease Reporting System (SDRS) was developed. This tool has real-time capability to inform the US swine industry on the macroepidemiological aspects of PRRSV detection, and is easily adaptable for other analytes relevant to the swine industry.

1 May 2018 in Journal of Swine Health and Production
Verified
Journal Article
Closed access
PDF file
WLWill A. Lopez
Will A. Lopez
JAJose Angulo
Jose Angulo
JZJeffrey J. Zimmerman
Jeffrey J. Zimmerman
DLDaniel CL Linhares
Daniel CL Linhares
Processing fluids (PF), the serosanguinous fluid recovered from piglet castration and tail docking, were used for porcine reproductive and respiratory syndrome virus (PRRSV) infection assessment. Processing fluid samples from four breed-to-wean herds were compared with standard sampling protocols, demonstrating PRRSV RNA detection in PF at greater frequency than standard schemes.

1 August 2019 in Porcine Health Management
Verified
Journal Article
Open access
PDF file
GTGiovani Trevisan
Giovani Trevisan
EJEva Jablonski
Eva Jablonski
JAJose Angulo
Jose Angulo
WLWill A. Lopez
Will A. Lopez
DLDaniel CL Linhares
Daniel CL Linhares
This was an observational study that prospectively followed 29 breeding herds for 65 weeks in the U.S.A. that became infected with porcine reproductive and respiratory syndrome virus (PRRSv). The herds operated in a four-week batch farrowing system and adopted a load-close-expose strategy using a modified-live virus vaccine to achieve PRRSv stability. The purpose of this study was to describe time to stability (TTS) based on RT-qPCR testing for PRRSv RNA on processing fluid samples in herds undergoing PRRSv elimination, after implementing herd closure and mass exposure to a PRRS modified-live virus (MLV) vaccine. For the purpose of this study, stability was defined as consistently producing PRRSv-negative pigs. Study herds were monitored until two consecutive piglet batches tested PRRSv RT-qPCR negative, then 30 due-to-wean piglet sera from the second batch were tested for PRRSv RNA by RT-qPCR. Once the farm re-opened, sera from incoming naïve gilts were tested for anti-PRRSv antibodies by ELISA at 30- and 60-days post-entry to confirm negative status to PRRSv. Day zero was the day of whole-herd exposure to a commercial PRRS vaccine virus. Twenty-eight of 29 herds (96.55%) achieved TTS within the study period. TTS ranged from 18 to 55 weeks with a median of 27 weeks. Serum from due-to-wean piglets was collected on 28 farms, of which 26 (92.85%) obtained PRRSv RT-qPCR-negative results on the first collection. At the end of the observational period, 16 sow farms successfully re-introduced PRRSv-naïve gilts with no detected serologic response. In conclusion, the median time to achieve TTS in breeding herds being operated in a four-week batch farrowing system undergoing PRRSv elimination using load-close-expose with attenuated virus vaccine was 27 weeks. Also, processing fluid-based monitoring of breeding herds under PRRS elimination was practical and reliable to assess PRRSv stability.

16 December 2015 in PLOS ONE
Verified
Journal Article
Open access
PDF file
DLDaniel CL Linhares
Daniel CL Linhares
CJClayton Johnson
Clayton Johnson
RMRobert B. Morrison
Robert B. Morrison
Porcine reproductive and respiratory syndrome virus (PRRSv) is a swine-specific pathogen that causes significant increases in production costs. When a breeding herd becomes infected, in an attempt to hasten control and elimination of PRRSv, some veterinarians have adopted a strategy called load-close-expose which consists of interrupting replacement pig introductions into the herd for several weeks (herd closure) and exposing the whole herd to a replicating PRRSv to boost herd immunity. Either modified-live virus (MLV) vaccine or live field-virus inoculation (FVI) is used. This study consisted of partial budget analyses to compare MLV to FVI as the exposure method of load-close-expose program to control and eliminate PRRSv from infected breeding herds, and secondly to estimate benefit / cost of vaccinating sow herds preventatively. Under the assumptions used in this study, MLV held economic advantage over FVI. However, sensitivity analysis revealed that decreasing margin over variable costs below $ 47.32, or increasing PRRSv-attributed cost above $18.89 or achieving time-to-stability before 25 weeks resulted in advantage of FVI over MLV. Preventive vaccination of sow herds was beneficial when the frequency of PRRSv infection was at least every 2.1 years. The economics of preventative vaccination was minimally affected by cost attributed to field-type PRRSv infection on growing pigs or by the breeding herd productivity level. The models developed and described in this paper provide valuable tools to assist veterinarians in their efforts to control PRRSv.

1 July 2019 in Preventive Veterinary Medicine
Verified
Journal Article
Closed access
GSGustavo Silva
Gustavo Silva
PYPaul Yeske
Paul Yeske
RMRobert B. Morrison
Robert B. Morrison
DLDaniel CL Linhares
Daniel CL Linhares

1 January 2020 in Preventive Veterinary Medicine
Verified
Journal Article
Closed access
MAM.N. Almeida
M.N. Almeida
HRH. Rotto
H. Rotto
PSP. Schneider
P. Schneider
CRC. Robb
C. Robb
JZJeff J Zimmermann
Jeff J Zimmermann
DLDaniel CL Linhares
Daniel CL Linhares