Benjamin Arenkiel

Dr. Benjamin Arenkiel

orcid

Research Focus & Metrics

Academic Career Length

24Years (2003-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 April 2007 in Neuron
Verified
Journal Article
Closed access
BABenjamin Arenkiel
Benjamin Arenkiel
João PeçaJoão Peça
João Peça
IDIan G. Davison
Ian G. Davison
CFCatia Feliciano
Catia Feliciano
KDKarl Deisseroth
Karl Deisseroth
GFGuoping Feng
Guoping Feng

6 February 2017 in Nature Neuroscience
Verified
Journal Article
Closed access
PDF file
CLChia-Ching John Lin
Chia-Ching John Lin
KYKwanha Yu
Kwanha Yu
AHAsante Hatcher
Asante Hatcher
THTeng-Wei Huang
Teng-Wei Huang
HLHyun Kyoung Lee
Hyun Kyoung Lee
BDBenjamin Deneen
Benjamin Deneen

15 October 2004 in Genes & Development
Verified
Journal Article
Open access
PDF file
CKCharles Keller
Charles Keller
BABenjamin Arenkiel
Benjamin Arenkiel
CCCheryl M. Coffin
Cheryl M. Coffin
NENabeel El-Bardeesy
Nabeel El-Bardeesy
Ronald A. DePinhoRonald A. DePinho
Ronald A. DePinho
MCMario Capecchi
Mario Capecchi
Alveolar rhabdomyosarcoma is an aggressive childhood muscle cancer for which outcomes are poor when the disease is advanced. Although well-developed mouse models exist for embryonal and pleomorphic rhabdomyosarcomas, neither a spontaneous nor a transgenic mouse model of alveolar rhabdomyosarcoma has yet been reported. We report the first mouse model of alveolar rhabdomyosarcoma using a conditional Pax3:Fkhr knock-in allele whose activation in late embryogenesis and postnatally is targeted to terminally differentiating Myf6-expressing skeletal muscle. In these mice, alveolar rhabdomyosarcomas occur but at low frequency, and Fkhr haploinsufficiency does not appear to accelerate tumorigenesis. However, Pax3:Fkhr homozygosity with accompanying Ink4a/ARF or Trp53 pathway disruption, by means of conditional Trp53 or Ink4a/ARF loss of function, substantially increases the frequencies of tumor formation. These results of successful tumor generation postnatally from a target pool of differentiating myofibers are in sharp contrast to the birth defects and lack of tumors for mice with prenatal and postnatal satellite cell triggering of Pax3:Fkhr. Furthermore, these murine alveolar rhabdomyosarcomas have an immunohistochemical profile similar to human alveolar rhabdomyosarcoma, suggesting that this conditional mouse model will be relevant to study of the disease and will be useful for preclinical therapeutic testing.

1 October 2012 in Neuron
Verified
Journal Article
Closed access
QCQian Chen
Qian Chen
JCJoseph Cichon
Joseph Cichon
WWWenting Wang
Wenting Wang
LQLi Qiu
Li Qiu
SLSeok-Jin R. Lee
Seok-Jin R. Lee
GFGuoping Feng
Guoping Feng

22 December 2003 in Development
Verified
Journal Article
Closed access
PDF file
TMTimothy L. Macatee
Timothy L. Macatee
BHBenjamin P. Hammond
Benjamin P. Hammond
BABenjamin Arenkiel
Benjamin Arenkiel
LFLily Francis
Lily Francis
DFDeborah U. Frank
Deborah U. Frank
AMAnne M. Moon
Anne M. Moon
Fibroblast growth factor 8 (Fgf8) is expressed in many domains of the developing embryo. Globally decreased FGF8 signaling during murine embryogenesis results in a hypomorphic phenotype with a constellation of heart, outflow tract, great vessel and pharyngeal gland defects that phenocopies human deletion 22q11 syndromes, such as DiGeorge. We postulate that these Fgf8 hypomorphic phenotypes result from disruption of local FGF8 signaling from pharyngeal arch epithelia to mesenchymal cells populating and migrating through the third and fourth pharyngeal arches. To test our hypothesis, and to determine whether the pharyngeal ectoderm and endoderm Fgf8 expression domains have discrete functional roles, we performed conditional mutagenesis of Fgf8 using novel Crerecombinase drivers to achieve domain-specific ablation of Fgf8 gene function in the pharyngeal arch ectoderm and endoderm. Remarkably, ablating FGF8 protein in the pharyngeal arch ectoderm causes failure of formation of the fourth pharyngeal arch artery that results in aortic arch and subclavian artery anomalies in 95% of mutants; these defects recapitulate the spectrum and frequency of vascular defects reported in Fgf8 hypomorphs. Surprisingly, no cardiac, outflow tract or glandular defects were found in ectodermal-domain mutants, indicating that ectodermally derived FGF8 has essential roles during pharyngeal arch vascular development distinct from those in cardiac, outflow tract and pharyngeal gland morphogenesis. By contrast, ablation of FGF8 in the third and fourth pharyngeal endoderm and ectoderm caused glandular defects and bicuspid aortic valve, which indicates that the FGF8 endodermal domain has discrete roles in pharyngeal and valvar development. These results support our hypotheses that local FGF8 signaling from the pharyngeal epithelia is required for pharyngeal vascular and glandular development, and that the pharyngeal ectodermal and endodermal domains of FGF8 have separate functions.

1 December 2018 in Cell Reports
Verified
Journal Article
Open access
BTBurak Tepe
Burak Tepe
MHMatthew C. Hill
Matthew C. Hill
BPBrandon T. Pekarek
Brandon T. Pekarek
PHPatrick Hunt
Patrick Hunt
TMThomas J. Martin
Thomas J. Martin
BABenjamin Arenkiel
Benjamin Arenkiel
Cellular heterogeneity within the mammalian brain poses a challenge toward understanding its complex functions. Within the olfactory bulb, odor information is processed by subtypes of inhibitory interneurons whose heterogeneity and functionality are influenced by ongoing adult neurogenesis. To investigate this cellular heterogeneity and better understand adult-born neuron development, we utilized single-cell RNA sequencing and computational modeling to reveal diverse and transcriptionally distinct neuronal and nonneuronal cell types. We also analyzed molecular changes during adult-born interneuron maturation and uncovered developmental programs within their gene expression profiles. Finally, we identified that distinct neuronal subtypes are differentially affected by sensory experience. Together, these data provide a transcriptome-based foundation for investigating subtype-specific neuronal function in the olfactory bulb (OB), charting the molecular profiles that arise during the maturation and integration of adult-born neurons and how they dynamically change in an activity-dependent manner.