Hironmoy Sarkar

Dr. Hironmoy Sarkar

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Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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18 October 2022 in ACS Omega
Verified
Journal Article
Open access
JCJoydeep Chakraborty
Joydeep Chakraborty
ACAnis Ahmad Chaudhary
Anis Ahmad Chaudhary
Salahuddin KhanSalahuddin Khan
Salahuddin Khan
HRHassan Ahmad Rudayni
Hassan Ahmad Rudayni
SRSayed Modinur Rahaman
Sayed Modinur Rahaman
HSHironmoy Sarkar
Hironmoy Sarkar
Methods enabling rapid and on-site detection of pathogenic bacteria are a prerequisite for public health assurance, medical diagnostics, ensuring food safety and security, and research. Many current bacteria detection technologies are inconvenient and time-consuming, making them unsuitable for field detection. New technology based on the CRISPR/Cas system has the potential to fill the existing gaps in detection. The clustered regularly interspaced short palindromic repeats (CRISPR) system is a part of the bacterial adaptive immune system to protect them from intruding bacteriophages. The immunological memory is saved by the CRISPR array of bacteria in the form of short DNA sequences (spacers) from invading viruses and incorporated with the CRISPR DNA repeats. Cas proteins are responsible for triggering and initiating the adaptive immune function of CRISPR/Cas systems. In advanced biological research, the CRISPR/Cas system has emerged as a significant tool from genome editing to pathogen detection. By considering its sensitivity and specificity, this system can become one of the leading detection methods for targeting DNA/RNA. This technique is well applied in virus detection like Dengue, ZIKA, SARS-CoV-2, etc., but for bacterial detection, this CRISPR/Cas system is limited to only a few organisms to date. In this review, we have discussed the different techniques based on the CRISPR/Cas system that have been developed for the detection of various pathogenic bacteria like L. monocytogenes, M. tuberculosis, Methicillin-resistant S. aureus, Salmonella, E. coli, P. aeruginosa, and A. baumannii.

1 February 2019 in Molecular and Cellular Endocrinology
Verified
Journal Article
Closed access
IBIndrashis Bhattacharya
Indrashis Bhattacharya
SBSayon Basu
Sayon Basu
BPBhola Pradhan
Bhola Pradhan
HSHironmoy Sarkar
Hironmoy Sarkar
PNPerumal Nagarajan
Perumal Nagarajan
SMSubeer S. Majumdar
Subeer S. Majumdar

5 December 2013 in Scientific Reports
Verified
Journal Article
Open access
AUAbul Usmani
Abul Usmani
NGNirmalya Ganguli
Nirmalya Ganguli
HSHironmoy Sarkar
Hironmoy Sarkar
SDSuveera Dhup
Suveera Dhup
SBSuryaprakash R. Batta
Suryaprakash R. Batta
SMSubeer S Majumdar
Subeer S Majumdar
Microinjection of foreign DNA in male pronucleus by in-vitro embryo manipulation is difficult but remains the method of choice for generating transgenic animals. Other procedures, including retroviral and embryonic stem cell mediated transgenesis are equally complicated and have limitations. Although our previously reported technique of testicular transgenesis circumvented several limitations, it involved many steps, including surgery and hemicastration, which carried risk of infection and impotency. We improved this technique further, into a two step non-surgical electroporation procedure, for making transgenic mice. In this approach, transgene was delivered inside both testes by injection and modified parameters of electroporation were used for in-vivo gene integration in germ cells. Using variety of constructs, germ cell integration of the gene and its transmission in progeny was confirmed by PCR, slot blot and immunohistochemical analysis. This improved technique is efficient, requires substantially less time and can be easily adopted by various biomedical researchers.

1 March 2015 in Endocrinology
Verified
Journal Article
Closed access
IBIndrashis Bhattacharya
Indrashis Bhattacharya
SBSayon Basu
Sayon Basu
KSKanchan Sarda
Kanchan Sarda
MGMukkesh Gautam
Mukkesh Gautam
PNPerumal Nagarajan
Perumal Nagarajan
SMSubeer S. Majumdar
Subeer S. Majumdar
FSH acts via testicular Sertoli cells (Sc) bearing FSH receptor (FSH-R) for regulating male fertility. Despite an adult-like FSH milieu in infant boys and monkeys, spermatogenesis is not initiated until the onset of puberty. We used infant and pubertal monkey Sc to reveal the molecular basis underlying developmental differences of FSH-R signaling in them. Unlike pubertal Sc, increasing doses of FSH failed to augment cAMP production by infant Sc. The expression of Gαs subunit and Ric8b, which collectively activate adenylyl cyclase (AC) for augmenting cAMP production and gene transcription, were significantly low in infant Sc. However, forskolin, which acts directly on AC bypassing FSH-R, augmented cAMP production and gene transcription uniformly in both infant and pubertal Sc. FSH-induced Gαs mRNA expression was higher in pubertal Sc. However, Gαi-2 expression was down-regulated by FSH in pubertal Sc, unlike infant Sc. FSH failed, but forskolin or 8-Bromoadenosine 3',5'-cyclic monophosphate treatment to infant Sc significantly augmented the expression of transferrin, androgen binding protein, inhibin-β-B, stem cell factor, and glial-derived neurotropic factor, which are usually up-regulated by FSH in pubertal Sc during spermatogenic onset. This suggested that lack of FSH mediated down-regulation of Gαi-2 expression and limited expression of Gαs subunit as well as Ric8b may underlie limited FSH responsiveness of Sc during infancy. This study also divulged that intracellular signaling events downstream of FSH-R are in place and can be activated exogenously in infant Sc. Additionally, this information may help in the proper diagnosis and treatment of infertile individuals having abnormal G protein-coupled FSH-R.

10 March 2016 in PLOS ONE
Verified
Journal Article
Open access
PDF file
HSHironmoy Sarkar
Hironmoy Sarkar
SASatyapal Arya
Satyapal Arya
URUmesh Rai
Umesh Rai
SMSubeer S Majumdar
Subeer S Majumdar
Testis of Hemidactylus flaviviridis, commonly known as Indian wall lizard, displays a lack of cellular and metabolic activity in regressed phase of testis during non-breeding season of the year. Retracted Sertoli cells (Sc), fibroid myoid cells and pre-meiotic resting spermatogonia are observed in such testis. This situation is akin to certain forms of infertility in men where hormone supplementation fails to generate sperm despite the presence of Sc and germ cells (Gc) in testis. In testis of lizard, spermatogenesis is reinitiated upon increased level of hormones during appropriate season (phase of recrudescence). Study of genes associated with generation of sperm, from regressed adult testis in lizard, may provide valuable information for understanding certain forms of male idiopathic infertility. Subtractive hybridization using testicular RNA obtained from the regressed and active phases of lizard reproductive cycle led to identify eight partial mRNA sequences that showed sequence homology with mice genes. We further evaluated the gene expression prolife by real-time PCR in three different reproductive phases of H. flaviviridis: regressed (pre-meiotic), recrudescent (meiotic) and active (post meiotic), for comparison with the corresponding testicular phases found in testis of 5 days (pre-meiotic), 20 days (meiotic) and 60 days (post-meiotic) old mouse. This is the first report where genes associated with progression of spermatogenesis during active phase, which follows a regressed state of adult testis, were identified in lizard and found to be conserved in mouse. Six important genes, Hk1, Nme5, Akap4, Arih1, Rassf7 and Tubb4b were found to be strictly associated with active spermatogenesis in both mouse and lizard. Factors interfering with the expression of any of these genes may potentially abrogate the process of spermatogenesis leading to infertility. Such information may shed light on unknown causes of idiopathic male infertility.

4 July 2024 in The Journal of Antibiotics
Verified
Journal Article
Closed access
PDF file
JCJoydeep Chakraborty
Joydeep Chakraborty
RMRittick Mondal
Rittick Mondal
JSJasmine Sultana
Jasmine Sultana
SBSaptak Banerjee
Saptak Banerjee
AMAmit Kumar Mandal
Amit Kumar Mandal
HSHironmoy Sarkar
Hironmoy Sarkar