Alexey Y. Karulin

Dr. Alexey Y. Karulin


Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
31 May 2018 in Cells
Verified
Journal Article
Open access
PDF file
PFPhilipp Fecher
Philipp Fecher
RCRichard Caspell
Richard Caspell
VNVillian Naeem
Villian Naeem
AKAlexey Y. Karulin
Alexey Y. Karulin
SKStefanie Kuerten
Stefanie Kuerten
Paul LehmannPaul Lehmann
Paul Lehmann
In individuals who have once developed humoral immunity to an infectious/foreign antigen, the antibodies present in their body can mediate instant protection when the antigen re-enters. Such antigen-specific antibodies can be readily detected in the serum. Long term humoral immunity is, however, also critically dependent on the ability of memory B cells to engage in a secondary antibody response upon re-exposure to the antigen. Antibody molecules in the body are short lived, having a half-life of weeks, while memory B cells have a life span of decades. Therefore, the presence of serum antibodies is not always a reliable indicator of B cell memory and comprehensive monitoring of humoral immunity requires that both serum antibodies and memory B cells be assessed. The prevailing view is that resting memory B cells and B cell blasts in peripheral blood mononuclear cells (PBMC) cannot be cryopreserved without losing their antibody secreting function, and regulated high throughput immune monitoring of B cell immunity is therefore confined to—and largely limited by—the need to test freshly isolated PBMC. Using optimized protocols for freezing and thawing of PBMC, and four color ImmunoSpot® analysis for the simultaneous detection of all immunoglobulin classes/subclasses we show here that both resting memory B cells and B cell blasts retain their ability to secrete antibody after thawing, and thus demonstrate the feasibility of B cell immune monitoring using cryopreserved PBMC.

29 June 2018
Verified
Book Chapter
Closed access
PDF file
ZMZoltán Megyesi
Zoltán Megyesi
PLPaul V. Lehmann
Paul V. Lehmann
AKAlexey Y. Karulin
Alexey Y. Karulin

29 June 2018
Verified
Book Chapter
Closed access
PDF file
AKAlexey Y. Karulin
Alexey Y. Karulin
ZMZoltán Megyesi
Zoltán Megyesi
RCRichard Caspell
Richard Caspell
JHJodi Hanson
Jodi Hanson
PLPaul V. Lehmann
Paul V. Lehmann

24 April 2018 in Cells
Verified
Journal Article
Open access
PDF file
AWAnna Welter
Anna Welter
SSSrividya Sundararaman
Srividya Sundararaman
RLRuliang Li
Ruliang Li
TZTing Zhang
Ting Zhang
AKAlexey Y. Karulin
Alexey Y. Karulin
Paul LehmannPaul Lehmann
Paul Lehmann
One of the primary effector functions of immune cells is the killing of virus-infected or malignant cells in the body. Natural killer (NK) and CD8 effector T cells are specialized for this function. The gold standard for measuring such cell-mediated cytolysis has been the chromium release assay, in which the leakage of the radioactive isotope from damaged target cells is being detected. Flow cytometry-based single cell analysis of target cells has recently been established as a non-radioactive alternative. Here we introduce a target cell visualization assay (TVA) that applies similar target cell staining approaches as used in flow cytometry but based on single cell computer image analysis. Two versions of TVA are described here. In one, the decrease in numbers of calcein-stained, i.e., viable, target cells is assessed. In the other, the CFSE/PI TVA, the increase in numbers of dead target cells is established in addition. TVA assays are shown to operate with the same sensitivity as standard chromium release assays, and, leaving data audit trails in form of scanned (raw), analyzed, and quality-controlled images, thus meeting requirements for measuring cell-mediated cytolysis in a regulated environment.

15 January 2026 in Vaccines
Verified
Journal Article
Open access
PDF file
Greg KirchenbaumGreg Kirchenbaum
Greg Kirchenbaum
NBNoémi Becza
Noémi Becza
Lingling YaoLingling Yao
Lingling Yao
AKAlexey Y. Karulin
Alexey Y. Karulin
Paul LehmannPaul Lehmann
Paul Lehmann
Background/Objectives: Despite clonal expansion during a primary immune response, or after subsequent antigen encounters, the frequency of memory B cells (Bmem) specific for an antigen remains low, making their detection difficult. However, unlike serum antibodies, which have a short half-life in vivo and thus require continuous replenishment to maintain stable titers, circulating Bmem are long-lived; they preserve immunological preparedness through their ability to rapidly engage in recall responses and differentiate into antibody-secreting cells (ASCs) upon antigen encounter. To this end, development of assays suited for the reliable detection of rare antigen-specific Bmem is critical and can provide insights into an individual’s antigen exposure history and immune status beyond that offered by traditional serum antibody measurements alone. Methods: ImmunoSpot® has emerged as a suitable technique for the detection of individual antigen-specific B cells through visualizing their antibody-derived secretory footprints. Here, we report the theoretical and practical foundations for detecting rare antigen-specific Bmem in human peripheral blood mononuclear cells (PBMC). Leveraging the unique availability of verifiably naïve vs. antigen-experienced human samples, we used SARS-CoV-2 Spike (S-) and Nucleocapsid (NCAP) antigens to interrogate the presence of Bmem with these respective specificities. Results: While 100% diagnostic accuracy was achieved for both antigens, detection of NCAP-specific Bmem required reducing the lower detection limit of the standard assay. Specifically, this was achieved by testing a total of 2 million PBMC across multiple replicate assay wells and assessing the cumulative number of secretory footprints detected. Conclusion: The protocols described here should facilitate the reliable detection of ASCs present at varying precursor frequencies and serve as guidance for routine immune monitoring of rare Bmem with specificity for any antigen.

17 December 2025 in Preprints.org
Verified
Preprint
Open access
PDF file
Greg KirchenbaumGreg Kirchenbaum
Greg Kirchenbaum
NBNoémi Becza
Noémi Becza
Lingling YaoLingling Yao
Lingling Yao
AKAlexey Y. Karulin
Alexey Y. Karulin
Paul LehmannPaul Lehmann
Paul Lehmann
Despite clonal expansion during a primary immune response, or after sub-sequent antigen encounters, the frequency of memory B cells (Bmem) specific for an antigen remains low, making their detection difficult. However, unlike serum an-tibodies, which have a short half-life in vivo and thus require continuous replen-ishment to maintain stable titers, circulating Bmem are long-lived; they preserve immunological preparedness through their ability to rapidly engage in recall re-sponses and differentiate into antibody-secreting cells (ASCs) upon antigen en-counter. Consequently, developing means for the reliable detection of anti-gen-specific Bmem promises to offer a window into an individual’s exposure history and immune status beyond that gleaned from traditional serum antibody meas-urements alone. ImmunoSpot® has emerged as a suitable technique for the de-tection of individual antigen-specific B cells through visualizing their anti-body-derived secretory footprints. Here, we report the theoretical and practical foundations for detecting rare antigen-specific Bmem in human peripheral blood mononuclear cells (PBMC). Leveraging the unique availability of verifiably naïve vs. antigen-experienced human samples, we used SARS-CoV-2 Spike (S-) and Nucleocapsid (NCAP) antigens to interrogate the presence of Bmem with these re-spective specificities. While 100% diagnostic accuracy was achieved for both an-tigens, detection of NCAP-specific Bmem required extension of the lower detection limit (LOD) of the standard assay. This could be achieved using 2 million PBMC in aggregate. The protocols described here should facilitate reliable detection of ASC present at varying precursor frequencies and serve as guidance for routine im-mune monitoring of rare Bmem with specificity for any antigen.