Paul A Clarke

Dr. Paul A Clarke


Research Focus & Metrics

Academic Career Length

37Years (1990-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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23 February 2018 in Science
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GVGeorgios Vlachogiannis
Georgios Vlachogiannis
SHSomaieh Hedayat
Somaieh Hedayat
AVAlexandra Vatsiou
Alexandra Vatsiou
YJYann Jamin
Yann Jamin
JFJavier Fernández-Mateos
Javier Fernández-Mateos
NVNicola Valeri
Nicola Valeri
Cancer organoids to model therapy response: Cancer organoids are miniature, three-dimensional cell culture models that can be made from primary patient tumors and studied in the laboratory. Vlachogiannis et al. asked whether such “tumor-in-a-dish” approaches can be used to predict drug responses in the clinic. They generated a live organoid biobank from patients with metastatic gastrointestinal cancer who had previously been enrolled in phase I or II clinical trials. This allowed the authors to compare organoid drug responses with how the patient actually responded in the clinic. Encouragingly, the organoids had similar molecular profiles to those of the patient tumor, reinforcing their value as a platform for drug screening and development. Science , this issue p. 920

28 August 2001 in British Journal of Cancer
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Journal Article
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HAH J N Andreyev
H J N Andreyev
ANA R Norman
A R Norman
DCDavid Cunningham
David Cunningham
JOJ Oates
J Oates
BDB R Dix
B R Dix
NUN Urosevic
N Urosevic
Presented by the Kirsten ras in Colorectal Cancer Collaborative Group

29 August 2008 in Journal of Medicinal Chemistry
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Journal Article
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AFAdrian J. Folkes
Adrian J. Folkes
KAKhatereh Ahmadi
Khatereh Ahmadi
WAWendy K. Alderton
Wendy K. Alderton
SASonia Alix
Sonia Alix
SBStewart J. Baker
Stewart J. Baker
SSStephen J. Shuttleworth
Stephen J. Shuttleworth

6 May 1998 in JNCI: Journal of the National Cancer Institute
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HAH. Jervoise N. Andreyev
H. Jervoise N. Andreyev
ANAndrew R. Norman
Andrew R. Norman
PCPaul A Clarke
Paul A Clarke
DCDavid Cunningham
David Cunningham
JOJacqueline R. Oates
Jacqueline R. Oates
Background: Kirsten ras (Ki-ras) gene mutations occur early in the progression of colorectal adenoma to carcinoma. The aim of this collaborative study was to clarify the association between Ki-ras mutations, patient outcome, and tumor characteristics by use of data from colorectal cancer patients worldwide. Methods: Investigators who had published data on Ki-ras and colorectal cancer were invited to complete a questionnaire for each patient entered into a database. Twosided statistical tests were used to analyze data. Results: Patients (n = 2721) were recruited from 22 groups in 13 countries. Mutations of Ki-ras codon 12 (wild type = GGT = glycine) or codon 13 (wild type = GGC = glycine) were detected in 37.7% of the tumors; 80.8% (584 of 723) of all the specified mutations occurred in codon 12, and 78.1% (565 of 723) of all the specified mutations were at the second base of either codon. Mutations were not associated with sex, age, tumor site, or Dukes' stage. Mutation rates seen in patients with sporadic tumors were comparable to those observed in patients with a predisposing cause for their cancer. Poorly differentiated tumors were less frequently mutated (P = .002). Multivariate analysis suggested that the presence of a mutation increased risk of recurrence (P<.001) and death (P = .004). In particular, any mutation of guanine (G) to thymine (T) but not to adenine (A) or to cytosine (C) increased the risk of recurrence (P = .006) and death (P<.001). When individual, specific mutations were evaluated, only valine codon 12 was found to convey an independent, increased risk of recurrence (P = .007) and death (P = .004). Conclusions: Ki-ras mutations are associated with increased risk of relapse and death, but some mutations are more aggressive than others.

3 March 2012 in Molecular Oncology
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Journal Article
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SHSwen Hoelder
Swen Hoelder
PCPaul A Clarke
Paul A Clarke
PWPaul Workman
Paul Workman
The discovery and development of small molecule cancer drugs has been revolutionised over the last decade. Most notably, we have moved from a one‐size‐fits‐all approach that emphasized cytotoxic chemotherapy to a personalised medicine strategy that focuses on the discovery and development of molecularly targeted drugs that exploit the particular genetic addictions, dependencies and vulnerabilities of cancer cells. These exploitable characteristics are increasingly being revealed by our expanding understanding of the abnormal biology and genetics of cancer cells, accelerated by cancer genome sequencing and other high‐throughput genome‐wide campaigns, including functional screens using RNA interference. In this review we provide an overview of contemporary approaches to the discovery of small molecule cancer drugs, highlighting successes, current challenges and future opportunities. We focus in particular on four key steps: Target validation and selection; chemical hit and lead generation; lead optimization to identify a clinical drug candidate; and finally hypothesis‐driven, biomarker‐led clinical trials. Although all of these steps are critical, we view target validation and selection and the conduct of biology‐directed clinical trials as especially important areas upon which to focus to speed progress from gene to drug and to reduce the unacceptably high attrition rate during clinical development. Other challenges include expanding the envelope of druggability for less tractable targets, understanding and overcoming drug resistance, and designing intelligent and effective drug combinations. We discuss not only scientific and technical challenges, but also the assessment and mitigation of risks as well as organizational, cultural and funding problems for cancer drug discovery and development, together with solutions to overcome the ‘Valley of Death’ between basic research and approved medicines. We envisage a future in which addressing these challenges will enhance our rapid progress towards truly personalised medicine for cancer patients.

1 December 2002 in Molecular Cell
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BPBarry Panaretou
Barry Panaretou
GSGiuliano Siligardi
Giuliano Siligardi
PMPhilippe Meyer
Philippe Meyer
AMAlison Maloney
Alison Maloney
JSJanis K. Sullivan
Janis K. Sullivan
Chrisostomos ProdromouChrisostomos Prodromou
Chrisostomos Prodromou