Zeynep Ocak

Dr. Zeynep Ocak


Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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Verified
Journal Article
Open access
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BOBeyza Ozcinar
Beyza Ozcinar
ZOZeynep Ocak
Zeynep Ocak
DBDeryanaz Billur
Deryanaz Billur
BEBaris Ertugrul
Baris Ertugrul
OTOzlem Timirci-Kahraman
Ozlem Timirci-Kahraman
Granulomatous mastitis (GM) is a rare, benign, but chronic and recurrent inflammatory breast disease that significantly impacts physical and psychological well-being. It often presents symptoms such as pain, swelling, and discharge, leading to diagnostic confusion with malignancy. The etiology of GM remains unclear, though autoimmune and multifactorial components are suspected. This study aimed to explore the genetic underpinnings of GM using whole-exome sequencing (WES) on 22 GM patients and 52 healthy controls to identify single nucleotide variants (SNVs) and copy number variations (CNVs) potentially linked to the disease. WES analysis revealed novel SNVs in six genes: BRCA2 (rs169547), CFTR (rs4727853), NCF1 (rs10614), PTPN22 (rs2476601), HLA-DRB1 (seven variants), and C3 (rs406514). Notably, most of these variants are associated with immune regulation and inflammatory pathways, supporting the hypothesis that GM is an autoimmune disease. However, all identified variants were classified as benign according to the American College of Medical Genetics and Genomics (ACMG) guidelines, necessitating further investigation into their potential functional effects. Despite conducting CNV analysis, no significant variations were identified. This study represents a foundational step in linking genetic predisposition to GM and highlights the need for integrating genetic, clinical, and functional data to better understand GM’s pathophysiology. Future research should focus on larger cohorts, functional studies, and exploring multifactorial contributors to GM, including hormonal and environmental factors.

13 February 2016 in International Journal of Cardiology
Verified
Journal Article
Closed access
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HBHelen Bornaun
Helen Bornaun
KOKazim Oztarhan
Kazim Oztarhan
ZOZeynep Ocak
Zeynep Ocak
AEAli Ekiz
Ali Ekiz
KUKorkut Ulucan
Korkut Ulucan
AGAli Gedikbasi
Ali Gedikbasi


1 January 2021 in The Eurasian Journal of Medicine
Verified
Journal Article
Open access
CKcigdem yuce kahraman
cigdem yuce kahraman
ATArzu Tatar
Arzu Tatar
MKMuzaffer Keles
Muzaffer Keles
ZOZeynep Ipek Ocak
Zeynep Ipek Ocak
ATAbdulgani Tatar
Abdulgani Tatar
Objective: Nasal polyposis (NP) is an inflammatory chronic disease in which polyps are located in the nose or paranasal sinuses. A disintegrin and metalloproteinase with thrombospondin motifs (ADAMTS) genes have roles in vascular biology, inflammation, tissue morphogenesis, and pathophysiological remodeling. Therefore, some members of the ADAMTS gene family may contribute to pathogenesis of NPs. This study aimed to detect the potential relation between NP and the expression levels of ADAMTS 5, 8, and 9 genes. Materials and Methods: This study consisted of nasal polyp tissues from 34 patients in whom nasal polyps had been diagnosed clinically, and healthy nasal mucosal tissues from 14 controls. RNA was isolated from the nasal polyps and normal nasal mucosal tissue in each subject. The expression levels of ADAMTS 5, 8, and 9 genes in the patients and controls were detected by quantitative real-time reverse transcriptase polymerase chain reaction (qRT-PCR) method. Results: The expression levels of ADAMTS 5 and 9 genes were significantly decreased in NP tissues. In contrast, the expression levels of ADAMTS 8 genes were also decreased in NP tissues, but they were not significantly different from those in the normal nasal tissues. Conclusion: An association was detected between the expression levels of ADAMTS genes and NP. ADAMTS 5 and 9 genes may have an effect on the formation of NP. Cite this article as: Kahraman C, Tatar A, Keles M, Ocak ZI, Tatar A. Is There an Association Between Nasal Polyposis and ADAMTS Genes Expressions? Eurasian J Med 2021; 53(1): 19-21.

1 January 2016 in Medicina Oral Patología Oral y Cirugia Bucal
Verified
Journal Article
Open access
UOU Ozan
U Ozan
ZOZ Ocak
Z Ocak
FOF Ozan
F Ozan
EOEa Oktay
Ea Oktay
OTO Toptas
O Toptas
KEK Er
K Er
The aim of this study was to investigate the role of gene variations of Toll-like receptors (TLR) 2, 3, and 4 on genetic susceptibility to periapical pathosis. One hundred patients were included in the study and divided into two groups as follows; Control Group (n=50) that have root canal treatment and no periapical lesion, Patient Group (n=50) that have root canal treatment and periapical lesion. TLR2 Arg753Gln, TLR3 (c.1377C/T) and TLR4 Asp299Gly and Thr399Ile polymorphisms were genotyped by using PCR-RFLP. Genotypical analysis of control and patient groups were investigated to disclose whether there is any association between periapical lesions and gene variations. There are no significant statistical differences between control and patient groups according to TLR 2 and 4 gene sequence. On the contrary, CC allele detected 74% for TLR 3 in patient group, and this difference was found to be statistically significant (p < 0.005). According to these results, it can be suggested that patients with Toll-like receptor 3 gene polymorphisms could be susceptible to periapical pathosis. Key words:Toll-like receptors, periapical pathosis, endodontics.