Julien Colomb

Julien Colomb

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Research Focus & Metrics

Academic Career Length

20Years (2007-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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29 November 2017 in F1000Research
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JTJonathan Tennant
Jonathan Tennant
JDJonathan M. Dugan
Jonathan M. Dugan
DGDaniel Graziotin
Daniel Graziotin
DJDamien Jacques
Damien Jacques
Francois WaldnerFrancois Waldner
Francois Waldner
JCJulien Colomb
Julien Colomb
Peer review of research articles is a core part of our scholarly communication system. In spite of its importance, the status and purpose of peer review is often contested. What is its role in our modern digital research and communications infrastructure? Does it perform to the high standards with which it is generally regarded? Studies of peer review have shown that it is prone to bias and abuse in numerous dimensions, frequently unreliable, and can fail to detect even fraudulent research. With the advent of web technologies, we are now witnessing a phase of innovation and experimentation in our approaches to peer review. These developments prompted us to examine emerging models of peer review from a range of disciplines and venues, and to ask how they might address some of the issues with our current systems of peer review. We examine the functionality of a range of social Web platforms, and compare these with the traits underlying a viable peer review system: quality control, quantified performance metrics as engagement incentives, and certification and reputation. Ideally, any new systems will demonstrate that they out-perform and reduce the biases of existing models as much as possible. We conclude that there is considerable scope for new peer review initiatives to be developed, each with their own potential issues and advantages. We also propose a novel hybrid platform model that could, at least partially, resolve many of the socio-technical issues associated with peer review, and potentially disrupt the entire scholarly communication system. Success for any such development relies on reaching a critical threshold of research community engagement with both the process and the platform, and therefore cannot be achieved without a significant change of incentives in research environments.

13 April 2007 in Journal of Comparative Neurology
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RBRüdiger Bader
Rüdiger Bader
JCJulien Colomb
Julien Colomb
BPBettina Pankratz
Bettina Pankratz
ASAnne Schröck
Anne Schröck
RSReinhard F. Stocker
Reinhard F. Stocker
MPMichael J. Pankratz
Michael J. Pankratz

13 April 2007 in Journal of Comparative Neurology
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JCJulien Colomb
Julien Colomb
NGNicola Grillenzoni
Nicola Grillenzoni
ARAriane Ramaekers
Ariane Ramaekers
RSReinhard F. Stocker
Reinhard F. Stocker

11 June 2009 in Genes, Brain and Behavior
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Journal Article
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JCJulien Colomb
Julien Colomb
LKL. Kaiser
L. Kaiser
MCM.‐A. Chabaud
M.‐A. Chabaud
TPT. Preat
T. Preat

9 August 2012 in PLOS ONE
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Journal Article
Open access
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JCJulien Colomb
Julien Colomb
LRLutz Reiter
Lutz Reiter
JBJedrzej Blaszkiewicz
Jedrzej Blaszkiewicz
JWJan Wessnitzer
Jan Wessnitzer
BBBjörn Brembs
Björn Brembs
Insects have been among the most widely used model systems for studying the control of locomotion by nervous systems. In Drosophila, we implemented a simple test for locomotion: in Buridan's paradigm, flies walk back and forth between two inaccessible visual targets [1]. Until today, the lack of easily accessible tools for tracking the fly position and analyzing its trajectory has probably contributed to the slow acceptance of Buridan's paradigm. We present here a package of open source software designed to track a single animal walking in a homogenous environment (Buritrack) and to analyze its trajectory. The Centroid Trajectory Analysis (CeTrAn) software is coded in the open source statistics project R. It extracts eleven metrics and includes correlation analyses and a Principal Components Analysis (PCA). It was designed to be easily customized to personal requirements. In combination with inexpensive hardware, these tools can readily be used for teaching and research purposes. We demonstrate the capabilities of our package by measuring the locomotor behavior of adult Drosophila melanogaster (whose wings were clipped), either in the presence or in the absence of visual targets, and comparing the latter to different computer-generated data. The analysis of the trajectories confirms that flies are centrophobic and shows that inaccessible visual targets can alter the orientation of the flies without changing their overall patterns of activity. Using computer generated data, the analysis software was tested, and chance values for some metrics (as well as chance value for their correlation) were set. Our results prompt the hypothesis that fixation behavior is observed only if negative phototaxis can overcome the propensity of the flies to avoid the center of the platform. Together with our companion paper, we provide new tools to promote Open Science as well as the collection and analysis of digital behavioral data.

1 December 2016 in Open Biology
Verified
Journal Article
Open access
EGE. Axel Gorostiza
E. Axel Gorostiza
JCJulien Colomb
Julien Colomb
BBBjörn Brembs
Björn Brembs
Like a moth into the flame—phototaxis is an iconic example for innate preferences. Such preferences probably reflect evolutionary adaptations to predictable situations and have traditionally been conceptualized as hard-wired stimulus–response links. Perhaps for that reason, the century-old discovery of flexibility in Drosophila phototaxis has received little attention. Here, we report that across several different behavioural tests, light/dark preference tested in walking is dependent on various aspects of flight. If we temporarily compromise flying ability, walking photopreference reverses concomitantly. Neuronal activity in circuits expressing dopamine and octopamine, respectively, plays a differential role in photopreference, suggesting a potential involvement of these biogenic amines in this case of behavioural flexibility. We conclude that flies monitor their ability to fly, and that flying ability exerts a fundamental effect on action selection in Drosophila . This work suggests that even behaviours which appear simple and hard-wired comprise a value-driven decision-making stage, negotiating the external situation with the animal's internal state, before an action is selected.