Dipanjan Roy

Mr. Dipanjan Roy

orcid

Research Focus & Metrics

Academic Career Length

5Years (2022-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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14 January 2025 in Cells
Verified
Journal Article
Open access
PDF file
RGRAHUL GUPTA
RAHUL GUPTA
DRDipanjan Roy
Dipanjan Roy
AGArijit Ghosh
Arijit Ghosh
YBYasmin Begum
Yasmin Begum
DGDipanjan Ghosh
Dipanjan Ghosh
SSSnehashikta Swaranakar
Snehashikta Swaranakar
Mebendazole (MBZ), a benzimidazole anthelmintic and cytoskeleton-disrupting compound, exhibits antitumor properties; however, its action on ovarian cancer (OC) is not clearly understood. This study evaluates the effect of MBZ on OC cell lines OVCAR3 and OAW42, focusing on cell proliferation, migration, invasion, and cancer stemness. The underlying mechanisms, including cytoskeletal disruption, epithelial–mesenchymal transition (EMT), and signaling pathways, were explored. MBZ inhibited OVCAR3 and OAW42 cell proliferation in a dose- and time-dependent manner. Additionally, MBZ significantly impedes migration, spheroid invasion, colony formation, and stemness. In addition, it reduced actin polymerization and down-regulated CSC markers (e.g., CD24, CD44, EpCAM). Moreover, MBZ suppressed MMP-9 activity and inhibited the EMT marker as judged by decreased N-Cadherin and Vimentin and increased E-Cadherin. Furthermore, MBZ induced G2/M cell cycle arrest by modulating Cyclin B1, CDC25C, and WEE1. Also, it triggered apoptosis by disrupting mitochondrial membrane potential. Mechanistic studies revealed a significant downregulation of Girdin, an Akt modulator, along with reduced p-Akt, p-IKKα/β, and p-NF-κB, indicating MBZ’s novel mechanism of action through the Girdin-mediated Akt/IKKα/β/NF-κB signaling axis. Thus, by targeting Girdin, MBZ presents a promising repurposed therapeutic strategy to inhibit cancer cell proliferation and metastasis in ovarian cancer.

4 June 2024 in Journal of Biological Chemistry
Verified
Journal Article
Open access
DDDhritiman Dey
Dhritiman Dey
RCRudra Chakravarti
Rudra Chakravarti
OBOindrila Bhattacharjee
Oindrila Bhattacharjee
SMSatyabrata Majumder
Satyabrata Majumder
DCDwaipayan Chaudhuri
Dwaipayan Chaudhuri
DGDipanjan Ghosh
Dipanjan Ghosh
The therapeutic application of CRISPR-Cas9 is limited due to its off-target activity. To have a better understanding of this off-target effect, we focused on its mismatch-prone PAM distal end. The off-target activity of SpCas9 depends directly on the nature of mismatches, which in turn results in deviation of the active site of SpCas9 due to structural instability in the RNADNA duplex strand. In order to test the hypothesis, we designed an array of mismatched target sites at the PAM distal end and performed in vitro and cell line-based experiments, which showed a strong correlation for Cas9 activity. We found that target sites having multiple mismatches in the 18th to 15th position upstream of the PAM showed no to little activity. For further mechanistic validation, Molecular Dynamics simulations were performed, which revealed that certain mismatches showed elevated root mean square deviation values that can be attributed to conformational instability within the RNA-DNA duplex. Therefore, for successful prediction of the off-target effect of SpCas9, along with complementation-derived energy, the RNA-DNA duplex stability should be taken into account.

1 January 2022
Verified
Book Chapter
Closed access
SBSanchayita Basu
Sanchayita Basu
PBPujaita Banerjee
Pujaita Banerjee
SBSudeshna Banerjee
Sudeshna Banerjee
BGBhaswati Ghosh
Bhaswati Ghosh
ABArunima Bhattacharjee
Arunima Bhattacharjee
AKAshutosh Kumar
Ashutosh Kumar

6 February 2026 in Chemico-Biological Interactions
Verified
Journal Article
Closed access
DDDebrupa Dutta
Debrupa Dutta
ABAshutosh Behera
Ashutosh Behera
DRDipanjan Roy
Dipanjan Roy
SSSoumi Sukla
Soumi Sukla
SBSugato Banerjee
Sugato Banerjee

25 September 2024
Verified
Book Chapter
Closed access
Tawsif Ahmed KaziTawsif Ahmed Kazi
Tawsif Ahmed Kazi
RCRudra Chakravarti
Rudra Chakravarti
MAMansi Arya
Mansi Arya
DRDipanjan Roy
Dipanjan Roy
AKAnam Najib Khan
Anam Najib Khan
BBBireswar Bhattacharya
Bireswar Bhattacharya
The pharmaceutical industry has increasingly turned to natural product-based drug development as synthetic drug discovery declines. Marine ecosystems have become a key source of novel therapeutic agents, known as marine natural products (NPs), celebrated for their unique chemical structures and diverse biological activities. This chapter comprehensively explores marine NPs as a rich source of pharmacologically active compounds. We discuss the shift towards natural product-based drugs, the growing focus on marine ecosystems, and the diverse pharmacological actions of marine NPs. We also classify these natural products based on their sources. Furthermore, the chapter highlights marine NPs that are in various phases of clinical trials, those approved, and those already marketed as drugs. We emphasize the translational potential of marine NPs, showcasing their journey from promising leads to clinically relevant drugs, underscoring their importance as a reservoir of bioactive compounds.

19 November 2025 in Respiratory Medicine
Verified
Journal Article
Closed access
RSRashmi Singh
Rashmi Singh
APAditya Kumar Pradhan
Aditya Kumar Pradhan
DRDipanjan Roy
Dipanjan Roy
MAMansi Arya
Mansi Arya
RCRudra Chakravarti
Rudra Chakravarti
BBBireswar Bhattacharya
Bireswar Bhattacharya