Dipanjan Ghosh

Dr. Dipanjan Ghosh

Assistant Professor
orcid

Research Focus & Metrics

Academic Career Length

23Years (2004-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 September 2019 in Life Sciences
Verified
Journal Article
Closed access
DGDarshana Gupta
Darshana Gupta
OBOindrila Bhattacharjee
Oindrila Bhattacharjee
DMDrishti Mandal
Drishti Mandal
MSMadhab Kumar Sen
Madhab Kumar Sen
DDDhritiman Dey
Dhritiman Dey
DGDipanjan Ghosh
Dipanjan Ghosh

1 August 2006 in International Immunopharmacology
Verified
Journal Article
Closed access
ISItisam Sarangi
Itisam Sarangi
DGDipanjan Ghosh
Dipanjan Ghosh
SBSujit Kumar Bhutia
Sujit Kumar Bhutia
SMSanjaya Kumar Mallick
Sanjaya Kumar Mallick
TMTapas K. Maiti
Tapas K. Maiti

31 March 2022 in Frontiers in Cell and Developmental Biology
Verified
Journal Article
Open access
RGRahul Gupta
Rahul Gupta
AGArijit Ghosh
Arijit Ghosh
RCRudra Chakravarti
Rudra Chakravarti
RSRajveer Singh
Rajveer Singh
RVRavichandiran Velayutham
Ravichandiran Velayutham
DGDipanjan Ghosh
Dipanjan Ghosh
The discovery of Clustered Regularly Interspaced Palindromic Repeats (CRISPR) and its associated Cas endonucleases in bacterial and archaeal species allowed scientists to modify, utilized, and revolutionize this tool for genetic alterations in any species. Especially the type II CRISPR-Cas9 system has been extensively studied and utilized for precise and efficient DNA manipulation in plant and mammalian systems over the past few decades. Further, the discovery of the type V CRISPR-Cas12 (Cpf1) system provides more flexibility and precision in DNA manipulation in prokaryotes, plants, and animals. However, much effort has been made to employ and utilize the above CRISPR tools for RNA manipulation but the ability of Cas9 and Cas12 to cut DNA involves the nuisance of off-target effects on genes and thus may not be employed in all RNA-targeting applications. Therefore, the search for new and diverse Cas effectors which can precisely detect and manipulate the targeted RNA begins and this led to the discovery of a novel RNA targeting class 2, type VI CRISPR-Cas13 system. The CRISPR-Cas13 system consists of single RNA-guided Cas13 effector nucleases that solely target single-stranded RNA (ssRNA) in a programmable way without altering the DNA. The Cas13 effectors family comprises four subtypes (a-d) and each subtype has distinctive primary sequence divergence except the two consensuses Higher eukaryotes and prokaryotes nucleotide-binding domain (HEPN) that includes RNase motifs i.e. R-X4-6-H. These two HEPN domains are solely responsible for executing targetable RNA cleavage activity with high efficiency. Further, recent studies have shown that Cas13d exhibits higher efficiency and specificity in cleaving targeted RNA in the mammalian system compared to other Cas13 endonucleases of the Cas13 enzyme family. In addition to that, Cas13d has shown additional advantages over other Cas13 variants, structurally as well as functionally which makes it a prominent and superlative tool for RNA engineering and editing. Therefore considering the advantages of Cas13d over previously characterized Cas13 subtypes, in this review, we encompass the structural and mechanistic properties of type VI CRISPR-Cas13d systems, an overview of the current reported various applications of Cas13d, and the prospects to improve Cas13d based tools for diagnostic and therapeutic purposes.

10 September 2020 in Bioscience Reports
Verified
Journal Article
Open access
RSRajveer Singh
Rajveer Singh
SCShivani Chandel
Shivani Chandel
DDDhritiman Dey
Dhritiman Dey
AGArijit Ghosh
Arijit Ghosh
SRSyamal Roy
Syamal Roy
DGDipanjan Ghosh
Dipanjan Ghosh
The prevalence of diabetes and its related complications are increasing significantly globally. Collected evidence suggested that several genetic and environmental factors contribute to diabetes mellitus. Associated complications such as retinopathy, neuropathy, nephropathy and other cardiovascular complications are a direct result of diabetes. Epigenetic factors include deoxyribonucleic acid (DNA) methylation and histone post-translational modifications. These factors are directly related with pathological factors such as oxidative stress, generation of inflammatory mediators and hyperglycemia. These result in altered gene expression and targets cells in the pathology of diabetes mellitus without specific changes in a DNA sequence. Environmental factors and malnutrition are equally responsible for epigenetic states. Accumulated evidence suggested that environmental stimuli alter the gene expression that result in epigenetic changes in chromatin. Recent studies proposed that epigenetics may include the occurrence of ‘metabolic memory’ found in animal studies. Further study into epigenetic mechanism might give us new vision into the pathogenesis of diabetes mellitus and related complication thus leading to the discovery of new therapeutic targets. In this review, we discuss the possible epigenetic changes and mechanism that happen in diabetes mellitus type 1 and type 2 separately. We highlight the important epigenetic and non-epigenetic therapeutic targets involved in the management of diabetes and associated complications.

12 May 2021 in RSC Advances
Verified
Journal Article
Open access
PDF file
RCRudra Chakravarti
Rudra Chakravarti
RSRajveer Singh
Rajveer Singh
AGArijit Ghosh
Arijit Ghosh
DDDhritiman Dey
Dhritiman Dey
PSPriyanka Sharma
Priyanka Sharma
DGDipanjan Ghosh
Dipanjan Ghosh
At the end of 2019, a life threatening viral infection (COVID-19) caused by a novel coronavirus, Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) was reported. This virus has spread worldwide in a short duration and forced the world to face unprecedented life and economic loss. To date, there are no known specific drugs to combat this virus and the process for new drug development is lengthy. Most promising candidates, which emerged as potential leads, were abandoned in the later phases of clinical trials. Repurposing of already approved drugs for other therapeutic applications can be done only after extensive testing for safety and efficacy. With no definite therapeutics in the horizon, natural products are in extensive use arbitrarily as anti-viral agents and immune boosters. For ages it has been known that most natural products possess potent anti-viral activity and it is no different for SARS-CoV-2. It has been shown that natural products display inhibitory effects on MERS-CoV and SARS-CoV infections. In silico studies have shown that various natural products have strong binding affinity for and inhibitory action on the non-structural proteins of the virus, namely PLPRO, MPRO, and RdRp, and structural proteins such as spike (S) protein. Since the virus utilizes the transmembrane ACE2 receptor of the host cell, it also proves to be a valid target for drug development. In this review promising targets for drug development against SARS-CoV-2 and anti-viral activities of some of the known natural products are discussed.

1 March 2006 in Aquaculture
Verified
Journal Article
Closed access
DKD. Kamilya
D. Kamilya
DGDipanjan Ghosh
Dipanjan Ghosh
SBS. Bandyopadhyay
S. Bandyopadhyay
BMB.C. Mal
B.C. Mal
TMT.K. Maiti
T.K. Maiti