The symbiotic relationship between cover crops and soil microorganisms is closely linked to nutrient cycling and crop growth within agroecosystems. However, how cover crops with different root functional traits influence soil microbial communities, soil properties, and crop yields has remained understudied. This study assessed the root traits of hairy vetch (HV) and rapeseed (RP), along with soil properties, sweet potato yield, and microbial enzyme activity under red soil dryland conditions. High-throughput sequencing was also employed to characterize the diversity, composition, and network structure of soil bacterial and fungal communities. According to the plant economic spectrum theory and our research results on plant root traits, HV can be identified as a resource-acquisitive cover crop, and RP treatment can be identified as a resource-conservative cover crop. Although RP treatment did not significantly increase the sweet potato yield, the increase rate reached 8.49%. Resource-conservative cover crops were associated with increased pH, SOC, and TP, which enhanced bacterial species diversity and boosted the populations of Chloroflexi and Alphaproteobacteria. In contrast, resource-acquisitive cover crops promoted the proliferation of Gammaproteobacteria. Network analysis indicated that resource-conservative cover crops facilitated network complexity through intensified intra-community competition. Resource-acquisitive cover crops enhanced the stability of microbial communities. Collectively, these findings underscore the distinct advantages of cover crops with varying root functional traits in shaping soil microbial communities. Appropriate cover crop rotations can effectively regulate microbial communities and hold the potential to enhance crop yield.

Arbuscular mycorrhizal fungi (AMF) demonstrate considerable potential for remediating soils contaminated with heavy metals. However, comprehensive research examining the effects of cadmium (Cd) contamination on AMF communities in paddy fields remains scarce, constraining their broader application in such environments. In this study, high-throughput sequencing was utilized to assess AMF community structure in paddy soils subjected to five distinct levels of Cd contamination. The study also explored the effect of different soil properties on AMF community dynamics. A total of 188 AMF taxa were identified across all soil samples, spanning four families. The Claroideoglomeraceae family emerged as the predominant group, exhibiting notable Cd tolerance. While elevated Cd concentrations inhibited the AMF community structure, lower concentrations increased the α-diversity of the community. Furthermore, soil-available phosphorus, calcium levels, and pH were found to be critical factors driving shifts in AMF community structure. Redundancy analysis explicitly quantified the relative strength of environmental factors, demonstrating that phosphorus and pH directly influenced the AMF community structure through significant effects, while Cd and calcium exerted their influence via indirect or nonlinear pathways. Given the relative abundance advantage of Claroideoglomeraceae in Cd-contaminated environments and its positive correlation with Cd concentration, we hypothesize that this group may exhibit Cd tolerance. Therefore, it could be considered a potential candidate species for prioritization in future field inoculation trials, and its practical application potential should be further validated.