Gabriele Varisco

Dr. Gabriele Varisco


Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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13 October 2020 in Acta Paediatrica
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Journal Article
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GVGabriele Varisco
Gabriele Varisco
HMHeidi van de Mortel
Heidi van de Mortel
LCLaura Cabrera‐Quiros
Laura Cabrera‐Quiros
LALouis Atallah
Louis Atallah
DHDirk Hueske‐Kraus
Dirk Hueske‐Kraus
CPCarola van Pul
Carola van Pul
Aim: To address alarm fatigue, a new alarm management system which ensures a quicker delivery of alarms together with waveform information on nurses' handheld devices was implemented and settings optimised. The effects of this clinical implementation on alarm rates and nurses' responsiveness were measured in an 18‐bed single family rooms neonatal intensive care unit (NICU).Methods: The technical implementation of the alarm management system was followed by clinical workflow optimisation. Alarms and vital parameters from October 2017 to December 2019 were analysed. Measures included monitoring alarms, nurses' response to alarms and time spent by patients in different saturation ranges. A survey among nurses was performed to evaluate changes in alarm rate and use of protocols.Results: A significant reduction of monitoring alarms per patient days was detected after the optimisation phase (in particular for SpO2 ≤ 80%, P < .001). More time was spent by infants within the optimal peripheral oxygen saturation range (88% < SpO2 < 95%, P < .001). Results from the surveys showed that false alarms are less likely to cause an inappropriate response after the optimisation phase.Conclusion: The implementation of an alarm management solution and an optimisation programme can safely reduce the alarm burden inside of the NICU environment.

26 September 2022 in Computer Methods and Programs in Biomedicine
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Journal Article
Open access
GVGabriele Varisco
Gabriele Varisco
ZPZheng Peng
Zheng Peng
DKDeedee Kommers
Deedee Kommers
ZZZhuozhao Zhan
Zhuozhao Zhan
WCWard Cottaar
Ward Cottaar
CPCarola van Pul
Carola van Pul
Apnea of prematurity is one of the most common diagnosis in neonatal intensive care units. Apneas can be classified as central, obstructive or mixed. According to the current international standards, minimal fluctuations or absence of fluctuations in the chest impedance (CI) suggest a central apnea (CA). However, automatic detection of reduced CI fluctuations leads to a high number of central apnea-suspected events (CASEs), the majority being false alarms. We aim to improve automatic detection of CAs by using machine learning to optimize detection of CAs among CASEs. Using an optimized algorithm for automated detection, all CASEs were detected in a population of 10 premature infants developing late-onset sepsis and 10 age-matched control patients. CASEs were inspected by two clinical experts and annotated as CAs or rejections in two rounds of annotations. A total of 47 features were extracted from the ECG, CI and oxygen saturation signals considering four 30 s-long moving windows, from 30 s before to 15 s after the onset of each CASE, using a moving step size of 5 s. Consecutively, new CA detection models were developed based on logistic regression with elastic net penalty, random forest and support vector machines. Performance was evaluated using both leave-one-patient-out and 10-fold cross-validation considering the mean area under the receiver-operating-characteristic curve (AUROC). The CA detection model based on logistic regression with elastic net penalty returned the highest mean AUROC when features extracted from all four time windows were included, both using leave-one-patient-out and 10-fold cross-validation (mean AUROC of 0.88 and 0.90, respectively). Feature relevance was found to be the highest for features derived from the CI. A threshold for the false positive rate in the mean receiver-operating-characteristic curve equal to 0.3 led to a high percentage of correct detections for all CAs (78.2%) and even higher for CAs followed by a bradycardia (93.4%) and CAs followed by both a bradycardia and a desaturation (95.2%), which are more critical for the well-being of premature infants. Models based on machine learning can lead to improved CA detection with fewer false alarms.

11 January 2022 in Early Human Development
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Journal Article
Open access
GVGabriele Varisco
Gabriele Varisco
ILIrene Lensen
Irene Lensen
DKDeedee Kommers
Deedee Kommers
PAPeter Andriessen
Peter Andriessen
PBPeter Bovendeerd
Peter Bovendeerd
CPCarola van Pul
Carola van Pul
Apnea of prematurity (AOP) is a critical condition for preterm infants which can lead to several adverse outcomes. Despite its relevance, mechanisms underlying AOP are still unclear. In this work we aimed at improving the understanding of AOP and its physiologic responses by analyzing and comparing characteristics of real infant data and model-based simulations of AOP. We implemented an existing algorithm to extract apnea events originating from the central nervous system from a population of 26 premature infants (1248 h of data in total) and investigated oxygen saturation (SpO2) and heart rate (HR) of the infants around these events. We then extended a previously developed cardio-vascular model to include the lung mechanics and gas exchange. After simulating the steady state of a preterm infant, which successfully replicated results described in previous literature studies, the extended model was used to simulate apneas with different lengths caused by a stop in respiratory muscles. Apneas identified by the algorithm and simulated by the model showed several similarities, including a far deeper decrease in SpO2, with the minimum reached later in time, in case of longer apneas. Results also showed some differences, either due to how measures are performed in clinical practice in our neonatal intensive care unit (e.g. delayed detection of decline in SpO2 after apnea onset due to signal averaging) or to the limited number of very long apneas (≥80 s) identified in our dataset.

1 February 2024 in Physiological Measurement
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Journal Article
Open access
GVGabriele Varisco
Gabriele Varisco
ZPZheng Peng
Zheng Peng
DKDeedee Kommers
Deedee Kommers
ECEduardus J E Cottaar
Eduardus J E Cottaar
PAPeter Andriessen
Peter Andriessen
CPCarola van Pul
Carola van Pul
Objective . Monitoring of apnea of prematurity, performed in neonatal intensive care units by detecting central apneas (CAs) in the respiratory traces, is characterized by a high number of false alarms. A two-step approach consisting of a threshold-based apneic event detection algorithm followed by a machine learning model was recently presented in literature aiming to improve CA detection. However, since this is characterized by high complexity and low precision, we developed a new direct approach that only consists of a detection model based on machine learning directly working with multichannel signals. Approach . The dataset used in this study consisted of 48 h of ECG, chest impedance and peripheral oxygen saturation extracted from 10 premature infants. CAs were labeled by two clinical experts. 47 features were extracted from time series using 30 s moving windows with an overlap of 5 s and evaluated in sets of 4 consecutive moving windows, in a similar way to what was indicated for the two-step approach. An undersampling method was used to reduce imbalance in the training set while aiming at increasing precision. A detection model using logistic regression with elastic net penalty and leave-one-patient-out cross-validation was then tested on the full dataset. Main results . This detection model returned a mean area under the receiver operating characteristic curve value equal to 0.86 and, after the selection of a FPR equal to 0.1 and the use of smoothing, an increased precision (0.50 versus 0.42) at the expense of a decrease in recall (0.70 versus 0.78) compared to the two-step approach around suspected apneic events. Significance . The new direct approach guaranteed correct detections for more than 81% of CAs with length L ≥ 20 s, which are considered among the most threatening apneic events for premature infants. These results require additional verifications using more extensive datasets but could lead to promising applications in clinical practice.

1 November 2023 in Physiological Measurement
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Journal Article
Open access
RKR M J S Kloonen
R M J S Kloonen
GVGabriele Varisco
Gabriele Varisco
EKE de Kort
E de Kort
PAP Andriessen
P Andriessen
HNHendrik Niemarkt
Hendrik Niemarkt
CPC van Pul
C van Pul
Objective . Less invasive surfactant administration (LISA) has been introduced to preterm infants with respiratory distress syndrome on continuous positive airway pressure (CPAP) support in order to avoid intubation and mechanical ventilation. However, after this LISA procedure, a significant part of infants fails CPAP treatment (CPAP-F) and requires intubation in the first 72 h of life, which is associated with worse complication free survival chances. The aim of this study was to predict CPAP-F after LISA, based on machine learning (ML) analysis of high resolution vital parameter monitoring data surrounding the LISA procedure. Approach . Patients with a gestational age (GA) <32 weeks receiving LISA were included. Vital parameter data was obtained from a data warehouse. Physiological features (HR, RR, peripheral oxygen saturation (SpO 2 ) and body temperature) were calculated in eight 0.5 h windows throughout a period 1.5 h before to 2.5 h after LISA. First, physiological data was analyzed to investigate differences between the CPAP-F and CPAP-Success (CPAP-S) groups. Next, the performance of two types of ML models (logistic regression: LR, support vector machine: SVM) for the prediction of CPAP-F were evaluated. Main results . Of 51 included patients, 18 (35%) had CPAP-F. Univariate analysis showed lower SpO2, temperature and heart rate variability (HRV) before and after the LISA procedure. The best performing ML model showed an area under the curve of 0.90 and 0.93 for LR and SVM respectively in the 0.5 h window directly after LISA, with GA, HRV, respiration rate and SpO 2 as most important features. Excluding GA decreased performance in both models. Significance . In this pilot study we were able to predict CPAP-F with a ML model of patient monitor signals, with best performance in the first 0.5 h after LISA. Using ML to predict CPAP-F based on vital signals gains insight in (possibly modifiable) factors that are associated with LISA failure and can help to guide personalized clinical decisions in early respiratory management.

23 August 2025 in Computer Methods and Programs in Biomedicine
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Journal Article
Open access
GVGabriele Varisco
Gabriele Varisco
ZPZheng Peng
Zheng Peng
HNHendrik Niemarkt
Hendrik Niemarkt
PAPeter Andriessen
Peter Andriessen
CPCarola van Pul
Carola van Pul
XLXi Long
Xi Long
Preterm infants are characterized by immature cardiorespiratory systems and require continuous monitoring of physiological signals in neonatal intensive care units (NICUs) to assess their clinical condition and return alarms in critical situations. However, many alarms are false or clinically irrelevant, leading to alarm fatigue for nurses and clinicians. A particularly high false alarm rate is reported for central apneas (CAs), with precision as low as 0.35. This study proposes neural networks to improve CA detection by increasing precision. We used a reference dataset of 10 preterm infants (951 annotated CAs across 480 h) and a hold-out dataset of 10 preterm infants characterized by fewer CAs (254 annotated CAs across 480 h). CA detection models were developed using features extracted from the electrocardiogram, chest impedance, and peripheral oxygen saturation, considering four consecutive 30-second moving windows with a 5-second time shift (four-window sets) as individual records. These were trained, optimized, and tested using different neural network architectures, hyperparameter tuning, and leave-one-patient-out cross-validation. Their evaluation was performed through different metrics, including precision, computed by considering all CAs and apneic events of different origins, and sensitivity for all CAs, CAs paired with bradycardia (heart rate, HR ≤ 80 bpm), and CAs paired with low HR (80 bpm < HR ≤ 100 bpm). The best-performing CA detection model, using convolutional neural networks (CNN), was trained and tested on the reference dataset. By retaining alarms detected in 5 four-window sets, it achieved a precision of 0.54 and a sensitivity of 0.75 for all CAs, 0.87 for CAs paired with bradycardia, and 0.88 for CAs paired with low HR, outperforming results found in previous studies and current clinical practice. Testing on the hold-out dataset showed a decrease in precision and sensitivity for all CAs, equal to 0.28 and 0.69, respectively. However, the sensitivity for CAs paired with bradycardia and with low HR remained high at 0.83 and 0.85. Larger datasets with more diverse CA distributions are needed to enhance generalization. Neural networks demonstrated potential to improve CA detection and reduce false alarms in NICUs, supporting more accurate monitoring strategies for preterm infants.