Xinying Shi

Dr. Xinying Shi


Research Focus & Metrics

Academic Career Length

2Years (2025-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
24 February 2025 in Plants
Verified
Journal Article
Open access
PDF file
GLGuimin Li
Guimin Li
XSXinying Shi
Xinying Shi
QLQinmin Lin
Qinmin Lin
MLMengmeng Lv
Mengmeng Lv
JCJing Chen
Jing Chen
Shijiang CaoShijiang Cao
Shijiang Cao
The tea plant (Camellia sinensis) is an economically important crop that plays an important role not only in the beverage industry but also in the pharmaceutical industry. The environment has a great influence on the quality of the tea plant. Heat shock factors (Hsfs) are transcriptional regulators that control the plant response to adversity. However, only a limited number of studies have reported the Hsf gene in Camellia sinensis, and most of these reports involve high-temperature, drought, and salt stress. Research on light, dark, and cold stress is limited. In this study, 22 CsHsf genes were obtained by whole genome sequencing and found to be located on 11 chromosomes. In addition, the gene structure, protein motif, and phylogeny were studied. We classified the genes into three major subfamilies: CsHsfA, CsHsfB, and CsHsfC. Interestingly, we found that there was more alignment between CsHsf and Hsf genes in dicotyledons, including Arabidopsis thaliana and Solanum lycopersicum, than in the monocotyledon Oryza sativa. The expression of many CsHsf genes was affected by low-temperature, light, and dark abiotic stresses. Notably, CsHsf15 and CsHsf16 showed high induction rates under both light and cold stress, and both genes carried cis-acting elements associated with light and low-temperature responses. These results lay a solid groundwork for further investigations into the involvement of CsHsf genes in the response of Camellia sinensis to abiotic stresses.

1 February 2025 in Plants
Verified
Journal Article
Open access
PDF file
YGyusen Gao
yusen Gao
YWYingxin Wen
Yingxin Wen
QLQinmin Lin
Qinmin Lin
YFYizhuo Feng
Yizhuo Feng
XSXinying Shi
Xinying Shi
Shijiang CaoShijiang Cao
Shijiang Cao
Tieguanyin tea, a renowned oolong tea, is one of the ten most famous teas in China. The Squamosa Promoter Binding Protein (SBP)-box transcription factor family, widely present in plants, plays a crucial role in plant development, growth, and stress responses. In this study, we identify and analyze 22 CsSBP genes at the genome-wide level. These genes were distributed unevenly across 11 chromosomes. Using Arabidopsis thaliana and Solanum lycopersicum L. as model organisms, we constructed a phylogenetic tree to classify these genes into six distinct subfamilies. Collinearity analysis revealed 20 homologous gene pairs between AtSBP and CsSBP, 21 pairs between SiSBP and CsSBP, and 14 pairs between OsSBP and CsSBP. Cis-acting element analysis indicated that light-responsive elements were the most abundant among the CsSBP genes. Protein motif, domain, and gene architecture analyses demonstrated that members of the same subgroup shared similar exon–intron structures and motif arrangements. Furthermore, we evaluated the expression profiles of nine CsSBP genes under light, shade, and cold stress using qRT-PCR analysis. Notably, CsSBP1, CsSBP17, and CsSBP19 were significantly upregulated under all three stresses. This study provides fundamental insights into the CsSBP gene family and offers a novel perspective on the mechanisms of SBP transcription factor-mediated stress responses, as well as Tieguanyin tea’s adaptation to environmental variations.

Verified
Journal Article
Open access
PDF file
YLYiran Lian
Yiran Lian
亮彭亮 彭
亮 彭
XSXinying Shi
Xinying Shi
QZQiumian Zheng
Qiumian Zheng
FDfan dunjin
fan dunjin
Weiyin ChangWeiyin Chang
Weiyin Chang
GOLDEN2-LIKE (GLK) transcription factors are crucial regulators of chloroplast development and stress responses in plants. In this study, we investigated the GLK gene family in Phoebe bournei (Hemsl.) Yen C. Yang, a near-threatened species important for forestry and wood utilization in China. We identified 61 PbGLK genes which were classified into seven subfamilies. Our analyses of their phylogenetic relationships, gene structures, and chromosomal distribution revealed diverse characteristics. Expression profiling under different tissues and abiotic stresses showed that PbGLK25 and PbGLK30 were particularly responsive to drought, heat, light, and shade stresses, with significant upregulation. These findings highlight the potential role of PbGLK genes in stress adaptation and provide insights for the genetic improvement of P. bournei.