Denis Novichikhin

Denis Novichikhin

orcid

Research Focus & Metrics

Academic Career Length

5Years (2022-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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10 February 2022 in Food Chemistry
Verified
Journal Article
Closed access
AOAlexey Orlov
Alexey Orlov
JMJuri A. Malkerov
Juri A. Malkerov
DNDenis Novichikhin
Denis Novichikhin
SZSergey L. Znoyko
Sergey L. Znoyko
MNMaxim Nikitin
Maxim Nikitin

Verified
Journal Article
Open access
PDF file
AOAlexey Orlov
Alexey Orlov
JMJuri Malkerov
Juri Malkerov
DNDenis Novichikhin
Denis Novichikhin
SZSergey L Znoyko
Sergey L Znoyko
MNMaxim Nikitin
Maxim Nikitin
Express and highly sensitive immunoassays for the quantitative registration of cardiac troponin I (cTnI) are in high demand for early point-of-care differential diagnosis of acute myocardial infarction. The selection of antibodies that feature rapid and tight binding with antigens is crucial for immunoassay rate and sensitivity. A method is presented for the selection of the most promising clones for advanced immunoassays via simultaneous characterization of interaction kinetics of different monoclonal antibodies (mAb) using a direct label-free method of multiplex spectral correlation interferometry. mAb-cTnI interactions were real-time registered on an epoxy-modified microarray glass sensor chip that did not require activation. The covalent immobilization of mAb microdots on its surface provided versatility, convenience, and virtually unlimited multiplexing potential. The kinetics of tracer antibody interaction with the “cTnI—capture antibody” complex was characterized. Algorithms are shown for excluding mutual competition of the tracer/capture antibodies and selecting the optimal pairs for different assay formats. Using the selected mAbs, a lateral flow assay was developed for rapid quantitative cTnI determination based on electronic detection of functionalized magnetic nanoparticles applied as labels (detection limit—0.08 ng/mL, dynamic range > 3 orders). The method can be extended to other molecular biomarkers for high-throughput screening of mAbs and rational development of immunoassays.

8 April 2023 in Molecules
Verified
Journal Article
Open access
PDF file
TETatiana N. Elizarova
Tatiana N. Elizarova
MAMaxim L. Antopolsky
Maxim L. Antopolsky
DNDenis Novichikhin
Denis Novichikhin
ASArtemiy Mikhailovich Skirda
Artemiy Mikhailovich Skirda
AOAlexey Orlov
Alexey Orlov
MNMaxim Nikitin
Maxim Nikitin
The therapeutic potential of short interfering RNA (siRNA) to treat many diseases that are incurable with traditional preparations is limited by the extensive metabolism of serum nucleases, low permeability through biological membrane barriers because of a negative charge, and endosomal trapping. Effective delivery vectors are required to overcome these challenges without causing unwanted side effects. Here, we present a relatively simple synthetic protocol to obtain positively charged gold nanoparticles (AuNPs) with narrow size distribution and the surface modified with Tat-related cell-penetrating peptide. The AuNPs were characterized using TEM and the localized surface plasmon resonance technique. The synthesized AuNPs showed low toxicity in experiments in vitro and were able to effectively form complexes with double-stranded siRNA. The obtained delivery vehicles were used for intracellular delivery of siRNA in an ARPE-19 cell line transfected with secreted embryonic alkaline phosphatase (SEAP). The delivered oligonucleotide remained intact and caused a significant knockdown effect on SEAP cell production. The developed material could be useful for delivery of negatively charged macromolecules, such as antisense oligonucleotides and various RNAs, particularly for retinal pigment epithelial cell drug delivery.

24 December 2022 in Chemosensors
Verified
Journal Article
Open access
PDF file
DNDenis Novichikhin
Denis Novichikhin
AOAlexey Orlov
Alexey Orlov
MAMaxim L. Antopolsky
Maxim L. Antopolsky
SZSergey L Znoyko
Sergey L Znoyko
MNMaxim Nikitin
Maxim Nikitin
Folic acid (FA) and its other forms known as folates are small molecules vital for humans. The high demand for increasingly sensitive methods of measuring folate concentrations is due to the fact that abnormal levels of FA cause severe health disorders. Besides, folates are used as recognition molecules in targeted drug delivery. The majority of FA measuring techniques are rather expensive, laborious, sometimes not sufficiently sensitive and specific, and often employ consumables that are too costly to be single-use for routine medical diagnostics. Here, we present a procedure for transformation of a simple microscope cover glass slip without deposition of any metal or dielectric films into a cost-efficient chemosensor chip interrogated by spectral correlation interferometry for highly sensitive measurements of the concentration of small molecules, as well as a feasibility study of long-term monitoring of such molecules in a flow mode. The obtained chips were tested for folate detection. The highly specific and sensitive measurements can be performed in real-time in a wide dynamic range of 0.9–220,000 pM. The developed method and single-use consumables are promising for concentration measurements of low molecular weight substances in pharmaceuticals and in vitro diagnostics.

20 December 2023 in Toxins
Verified
Journal Article
Open access
PDF file
AOAlexey Orlov
Alexey Orlov
SZSergey L Znoyko
Sergey L Znoyko
JMJuri Malkerov
Juri Malkerov
ASArtemiy Mikhailovich Skirda
Artemiy Mikhailovich Skirda
DNDenis Novichikhin
Denis Novichikhin
MNMaxim Nikitin
Maxim Nikitin
In this study, we present a novel and ultrasensitive magnetic lateral flow immunoassay (LFIA) tailored for the precise detection of zearalenone, a mycotoxin with significant implications for human and animal health. A versatile and straightforward method for creating non-covalent magnetic labels is proposed and comprehensively compared with a covalent immobilization strategy. We employ the magnetic particle quantification (MPQ) technique for precise detection of the labels and characterization of their functionality, including measuring the antibody sorption density on the particle surface. Through kinetic studies using the label-free spectral phase interferometry, the rate and equilibrium constants for the binding of monoclonal antibodies with free (not bound with carrier protein) zearalenone were determined to be kon = 3.42 × 105 M−1s−1, koff = 7.05 × 10−4 s−1, and KD = 2.06 × 10−9 M. The proposed MPQ-LFIA method exhibits detection limits of 2.3 pg/mL and 7.6 pg/mL when employing magnetic labels based on covalent immobilization and non-covalent sorption, with dynamic ranges of 5.5 and 5 orders, correspondingly. We have successfully demonstrated the effective determination of zearalenone in barley flour samples contaminated with Fusarium graminearum. The ease of use and effectiveness of developed test systems further enhances their value as practical tools for addressing mycotoxin contamination challenges.

3 November 2024 in Biosensors
Verified
Journal Article
Open access
PDF file
AOAlexey Orlov
Alexey Orlov
MZMaria Zolotova
Maria Zolotova
DNDenis Novichikhin
Denis Novichikhin
NBNikolai A. Belyakov
Nikolai A. Belyakov
SPSvetlana Protasova
Svetlana Protasova
Artem Vadimovich SinolitsArtem Vadimovich Sinolits
Artem Vadimovich Sinolits
This study presents the development of stannous chloride (SnCl2)-modified glass substrates for biomolecule immobilization and their application in fabricating sensor chips for label-free interferometric biosensors. The glass modification process was optimized, identifying a 5% SnCl2 concentration, a 45 min reaction time, and a 150 °C drying temperature as conditions for efficient protein immobilization. Based on the SnCl2-modified glass substrates and label-free spectral-phase interferometry, a biosensor was developed for the detection of aflatoxin B1 (AFB1)—a highly toxic and carcinogenic contaminant in agricultural products. The biosensor realizes a competitive immunoassay of a remarkable detection limit as low as 26 pg/mL of AFB1, and a five-order dynamic range. The biosensor performance was validated using real corn flour samples contaminated with Aspergillus flavus. The proposed approach not only provides a powerful tool for AFB1 detection for food safety monitoring but also demonstrates the potential of SnCl2-modified substrates as a versatile platform for the development of next-generation biosensors.