Rudolf Oldenbourg

Dr. Rudolf Oldenbourg

orcid

Research Focus & Metrics

Academic Career Length

29Years (1998-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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13 May 2019 in Nature Microbiology
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Journal Article
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MDMichael F. Dion
Michael F. Dion
MKMrinal Kapoor
Mrinal Kapoor
YSYingjie Sun
Yingjie Sun
SWSean Wilson
Sean Wilson
JRJoel Ryan
Joel Ryan
EGEthan C. Garner
Ethan C. Garner

1 September 2013 in Journal of Optics
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Journal Article
Closed access
SMShalin B Mehta
Shalin B Mehta
MSMichael Shribak
Michael Shribak
RORudolf Oldenbourg
Rudolf Oldenbourg
Polarized light microscopy provides unique opportunities for analyzing the molecular order in man-made and natural materials, including biological structures inside living cells, tissues, and whole organisms. 20 years ago, the LC-PolScope was introduced as a modern version of the traditional polarizing microscope enhanced by liquid crystal devices for the control of polarization, and by electronic imaging and digital image processing for fast and comprehensive image acquisition and analysis. The LCPolScope is commonly used for birefringence imaging, analyzing the spatial and temporal variations of the differential phase delay in ordered and transparent materials. Here we describe an alternative use of the LC-PolScope for imaging the polarization dependent transmittance of dichroic materials. We explain the minor changes needed to convert the instrument between the two imaging modes, discuss the relationship between the quantities measured with either instrument, and touch on the physical connection between refractive index, birefringence, transmittance, diattenuation, and dichroism.

1 January 1998 in Biophysical Journal
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Journal Article
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RORudolf Oldenbourg
Rudolf Oldenbourg
ESE.D. Salmon
E.D. Salmon
PTP.T. Tran
P.T. Tran

11 December 2017 in Nature Communications
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Journal Article
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PNPontus Nordenfelt
Pontus Nordenfelt
TMTravis I. Moore
Travis I. Moore
SMShalin B. Mehta
Shalin B. Mehta
JKJoseph Mathew Kalappurakkal
Joseph Mathew Kalappurakkal
VSVinay Swaminathan
Vinay Swaminathan
TSTimothy A. Springer
Timothy A. Springer
Integrin αβ heterodimer cell surface receptors mediate adhesive interactions that provide traction for cell migration. Here, we test whether the integrin, when engaged to an extracellular ligand and the cytoskeleton, adopts a specific orientation dictated by the direction of actin flow on the surface of migrating cells. We insert GFP into the rigid, ligand-binding head of the integrin, model with Rosetta the orientation of GFP and its transition dipole relative to the integrin head, and measure orientation with fluorescence polarization microscopy. Cytoskeleton and ligand-bound integrins orient in the same direction as retrograde actin flow with their cytoskeleton-binding β-subunits tilted by applied force. The measurements demonstrate that intracellular forces can orient cell surface integrins and support a molecular model of integrin activation by cytoskeletal force. Our results place atomic, Å-scale structures of cell surface receptors in the context of functional and cellular, μm-scale measurements.

1 January 1999 in Molecular Biology of the Cell
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Journal Article
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KKKaoru Katoh
Kaoru Katoh
KHKatherine Hammar
Katherine Hammar
PSPeter J. S. Smith
Peter J. S. Smith
RORudolf Oldenbourg
Rudolf Oldenbourg
We have investigated the dynamic behavior of cytoskeletal fine structure in the lamellipodium of nerve growth cones using a new type of polarized light microscope (the Pol-Scope). Pol-Scope images display with exquisite resolution and definition birefringent fine structures, such as filaments and membranes, without having to treat the cell with exogenous dyes or fluorescent labels. Furthermore, the measured birefringence of protein fibers in the thin lamellipodial region can be interpreted in terms of the number of filaments in the bundles. We confirmed that birefringent fibers are actin-based using conventional fluorescence-labeling methods. By recording movies of time-lapsed Pol-Scope images, we analyzed the creation and dynamic composition of radial fibers, filopodia, and intrapodia in advancing growth cones. The strictly quantitative information available in time-lapsed Pol-Scope images confirms previously deduced behavior and provides new insight into the architectural dynamics of filamentous actin.

1 August 2011 in Biophysical Journal
Verified
Journal Article
Closed access
BDBradley S. DeMay
Bradley S. DeMay
NNNaoki Noda
Naoki Noda
AGAmy S. Gladfelter
Amy S. Gladfelter
RORudolf Oldenbourg
Rudolf Oldenbourg