Kuo-chih Shih

Dr. Kuo-chih Shih

orcid

Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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17 September 2018 in Journal of the American Chemical Society
Verified
Journal Article
Open access
NMNicholas M. Matsumoto
Nicholas M. Matsumoto
RLRené P. M. Lafleur
René P. M. Lafleur
XLXianwen Lou
Xianwen Lou
KSKuo-chih Shih
Kuo-chih Shih
SWSjors P. W. Wijnands
Sjors P. W. Wijnands
EME. W. Meijer
E. W. Meijer
In biology, polymorphism is a well-known phenomenon by which a discreet biomacromolecule can adopt multiple specific conformations in response to its environment. The controlled incorporating polymorphism into non-covalent aqueous assemblies of synthetic small molecules is an important step towards the development of bioinspired responsive materials. Herein, we report on a family of carboxylic acid functionalized water-soluble benzene-1,3,5-tricarboxamides (BTAs) which self-assemble in water to form 1-dimensional fibers, membranes, and hollow nanotubes. Interestingly, one of the BTAs with the optimized position of the carboxylic group in the hydrophobic domain yields nanotubes that undergo reversible temperature-dependent dynamic re-organizations. SAXS and Cryo-TEM data show the formation of elongated, well-ordered nanotubes at elevated temperatures. At these temperatures, increased dynamics, as measured by hydrogen-deuterium exchange, provide enough flexibility to the system to form well-defined nanotube structure with apparently defect-free tube walls. Without this flexibility the structures are frozen into a variety of structures that are very similar at the supramolecular level, but less defined at the mesoscopic level.

29 November 2019 in Nature Communications
Verified
Journal Article
Open access
PDF file
ZSZiyuan Song
Ziyuan Song
HFHailin Fu
Hailin Fu
RBRyan Baumgartner
Ryan Baumgartner
LZLingyang Zhu
Lingyang Zhu
KSKuo-chih Shih
Kuo-chih Shih
JCJianjun Cheng
Jianjun Cheng
Enzymes provide optimal three-dimensional structures for substrate binding and the subsequent accelerated reaction. Such folding-dependent catalytic behaviors, however, are seldom mechanistically explored with reduced structural complexity. Here, we demonstrate that the α-helix, a much simpler structural motif of enzyme, can facilitate its own growth through the self-catalyzed polymerization ofN-carboxyanhydride (NCA) in dichloromethane. The reversible binding between the N terminus of α-helical polypeptides and NCAs promotes rate acceleration of the subsequent ring-opening reaction. A two-stage, Michaelis–Menten-type kinetic model is proposed by considering the binding and reaction between the propagating helical chains and the monomers, and is successfully utilized to predict the molecular weights and molecular-weight distributions of the resulting polymers. This work elucidates the mechanism of helix-induced, enzyme-mimetic catalysis, emphasizes the importance of solvent choice in the discovery of new reaction type, and provides a route for rapid production of well-defined synthetic polypeptides by taking advantage of self-accelerated ring-opening polymerizations.

21 July 2017 in Nature Communications
Verified
Journal Article
Open access
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ZSZiyuan Song
Ziyuan Song
RMRachael Mansbach
Rachael Mansbach
HHHua He
Hua He
KSKuo-chih Shih
Kuo-chih Shih
RBRyan Baumgartner
Ryan Baumgartner
JCJianjun Cheng
Jianjun Cheng
Synthetic polypeptides have received increasing attention due to their ability to form higher ordered structures similar to proteins. The control over their secondary structures, which enables dynamic conformational changes, is primarily accomplished by tuning the side-chain hydrophobic or ionic interactions. Herein we report a strategy to modulate the conformation of polypeptides utilizing donor–acceptor interactions emanating from side-chain H-bonding ligands. Specifically, 1,2,3-triazole groups, when incorporated onto polypeptide side-chains, serve as both H-bond donors and acceptors at neutral pH and disrupt the α-helical conformation. When protonated, the resulting 1,2,3-triazolium ions lose the ability to act as H-bond acceptors, and the polypeptides regain their α-helical structure. The conformational change of triazole polypeptides in response to the donor-acceptor pattern was conclusively demonstrated using both experimental-based and simulation-based methods. We further showed the utility of this transition by designing smart, cell-penetrating polymers that undergo acid-activated endosomal escape in living cells.

1 August 2017 in Carbohydrate Polymers
Verified
Journal Article
Closed access
ANAli Naderi
Ali Naderi
AKAndreas Koschella
Andreas Koschella
THThomas Heinze
Thomas Heinze
KSKuo-chih Shih
Kuo-chih Shih
Mu-Ping NiehMu-Ping Nieh
Mu-Ping Nieh
JEJohan Erlandson
Johan Erlandson

11 November 2019 in Journal of the American Chemical Society
Verified
Journal Article
Closed access
ZLZhen Li
Zhen Li
SCShuyu Chen
Shuyu Chen
CGChendi Gao
Chendi Gao
ZYZhiwei Yang
Zhiwei Yang
KSKuo-chih Shih
Kuo-chih Shih
GCGuosong Chen
Guosong Chen

24 May 2018 in Chemical Science
Verified
Journal Article
Open access
PDF file
SSSeth A. Sharber
Seth A. Sharber
KSKuo-chih Shih
Kuo-chih Shih
AMArielle Mann
Arielle Mann
FFFanny Frausto
Fanny Frausto
THTerry E. Haas
Terry E. Haas
STSamuel W. Thomas
Samuel W. Thomas
Alkyl chain length tunes the reversion temperature of mechanofluorochromic phenylene-ethynylenes that show reversible force-induced change of fluorescence from green to orange.