Background Chronic Obstructive Pulmonary Disease (COPD) is associated with increased fracture risk due to systemic inflammation, physical inactivity, and corticosteroid use. Pulmonary Rehabilitation (PR) improves physical function and quality of life in Chronic Obstructive Pulmonary Disease (COPD), but its effect on fracture risk remains unexplored. Objective To evaluate the effect of a PR program on the 10-year fracture risk (FRAX score), Bone Mineral Density (BMD), and secondary outcomes in COPD patients. Methods 10 patients with stable COPD, aged 55–80 years, will be enrolled in a single-centre, randomized controlled trial. Participants will be randomized to a PR group (exercise, dietary counselling, respiratory physiotherapy and standard medical care) or a control group (standard medical care). Outcomes will include the scores of the Fracture Risk Assessment Tool (FRAX®), the Bone Mineral Density-BMD (via DEXA), the BODE index [Body Mass Index-BMI, Airflow Obstruction (FEV1% pred), Dyspnoea (MRC sale), and exercise capacity (6MWT), the COPD Assessment Test (CAT), the Nijmegen Questionnaire-NQ, and the Borg dyspnoea scale, assessed at baseline and at 12 months. Statistical analysis will use 2×2 ANOVA repeated measures with Bonferroni adjustment. Anticipated Results PR is expected to reduce FRAX scores, improve BMD, mitigate mortality index, dysfunctional breathing patterns, and the impact of COPD in the participants’ health and daily life compared to standard care. Conclusion This trial will provide novel insights into PR’s role in fracture prevention for COPD patients, addressing a critical gap in holistic disease management. Trial registration: Australian New Zealand Clinical Trials Registry (ANZCTR). Trial id: ACTRN12623001282673, https://www.anzctr.org.au/Trial/Registration/TrialReview.aspx?id=384352&showOriginal=true&isReview=true Date submitted: 9/07/2023 Date registered: 8/12/2023 Protocol version: 28/10/2024