The Gabal Um Samra (GUS) compound intrusion in the Eastern Desert of Egypt consists of a co-magmatic series of syenogranite and alkali feldspar granite. Accessory minerals (e.g., zircon, monazite, allanite) are abundant. Geochemically, the GUS intrusion is a classic A-type granite. It is extensively fractionated, enriched in large ion lithophile elements and high field strength elements, and depleted in Ba, Sr, K, and Ti. Normalized rare earth element patterns are nearly flat, without any lanthanide tetrad anomalies, but with distinct negative Eu anomalies (Eu/Eu* = 0.14–0.22) due to feldspar fractionation. Paired Zr-Hf and Y-Ho element systematics indicate igneous rather than hydrothermal processes. The petrogenesis of the comparatively unaltered GUS intrusion offers an opportunity to refine the standard model for post-collisional felsic magmatism in the Neoproterozoic Arabian–Nubian Shield. It is explained by the partial melting of juvenile crust induced by lithospheric delamination, followed by extensive fractional crystallization. A quantitative mass-balance model shows that the granite varieties of the GUS intrusion plausibly represent liquids along a single liquid line of descent; but, if so, the more evolved, later pulses display anomalous enrichment in Rb, Nb, Ta, U, and REE. The most plausible source for this enrichment is the extraction of small-degree residual melts from earlier pulses and the mixing of the melts into the later pulses, an energetically favorable process we call “auto-assimilation”. A quantitative model shows that the residual liquid after 97.5% crystallization of the syenogranite can fit the major oxide and trace element data in the alkali feldspar granite if 0.07% by mass of this melt is added to the evolving system for each 1% crystal fractionation by mass. The GUS intrusion represents an example of moderate rare metal enrichment and concentration to sub-economic grade by auto-assimilation. Similar processes may affect intrusions that feature higher grade mineralization, but the evidence is often obscured by the extensive alteration of those deposits.