Andrei Semikhodskii

Dr. Andrei Semikhodskii

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Research Focus & Metrics

Academic Career Length

30Years (1997-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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18 February 2005 in Theoretical and Applied Genetics
Verified
Journal Article
Open access
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SQSteve Quarrie
Steve Quarrie
ASA. Steed
A. Steed
CCCristina Calestani
Cristina Calestani
ASAndrei Semikhodskii
Andrei Semikhodskii
CLC. Lebreton
C. Lebreton
DDD. Dodig
D. Dodig
A population of 96 doubled haploid lines (DHLs) was prepared from F1 plants of the hexaploid wheat cross Chinese Spring × SQ1 (a high abscisic acid-expressing breeding line) and was mapped with 567 RFLP, AFLP, SSR, morphological and biochemical markers covering all 21 chromosomes, with a total map length of 3,522 cM. Although the map lengths for each genome were very similar, the D genome had only half the markers of the other two genomes. The map was used to identify quantitative trait loci (QTLs) for yield and yield components from a combination of 24 site × treatment × year combinations, including nutrient stress, drought stress and salt stress treatments. Although yield QTLs were widely distributed around the genome, 17 clusters of yield QTLs from five or more trials were identified: two on group 1 chromosomes, one each on group 2 and group 3, five on group 4, four on group 5, one on group 6 and three on group 7. The strongest yield QTL effects were on chromosomes 7AL and 7BL, due mainly to variation in grain numbers per ear. Three of the yield QTL clusters were largely site-specific, while four clusters were largely associated with one or other of the stress treatments. Three of the yield QTL clusters were coincident with the dwarfing gene Rht-B1 on 4BS and with the vernalisation genes Vrn-A1 on 5AL and Vrn-D1 on 5DL. Yields of each DHL were calculated for trial mean yields of 6 g plant−1 and 2 g plant−1 (equivalent to about 8 t ha−1 and 2.5 t ha−1, respectively), representing optimum and moderately stressed conditions. Analyses of these yield estimates using interval mapping confirmed the group-7 effects on yield and, at 2 g plant−1, identified two additional major yield QTLs on chromosomes 1D and 5A. Many of the yield QTL clusters corresponded with QTLs already reported in wheat and, on the basis of comparative genetics, also in rice. The implications of these results for improving wheat yield stability are discussed.

1 April 2008 in Neuron
Verified
Journal Article
Closed access
QMQing-Jun Meng
Qing-Jun Meng
LLLarisa Logunova
Larisa Logunova
EMElizabeth S. Maywood
Elizabeth S. Maywood
MGMonica Gallego
Monica Gallego
JLJake Lebiecki
Jake Lebiecki
ALAndrew S.I. Loudon
Andrew S.I. Loudon

1 September 2003 in Current Biology
Verified
Journal Article
Closed access
ACAmanda-Jayne Francis Carr
Amanda-Jayne Francis Carr
JJJonathan D Johnston
Jonathan D Johnston
ASAndrei Semikhodskii
Andrei Semikhodskii
TNTania Nolan
Tania Nolan
Felino Ramon CagampangFelino Ramon Cagampang
Felino Ramon Cagampang
ALAndrew S.I. Loudon
Andrew S.I. Loudon

1 September 1997 in Plant Molecular Biology
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Journal Article
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SQSteve Quarrie
Steve Quarrie
DLDavid A. Laurie
David A. Laurie
JZJiahui Zhu
Jiahui Zhu
CLClaude Lebreton
Claude Lebreton
ASAndrei Semikhodskii
Andrei Semikhodskii
CCCristina Calestani
Cristina Calestani

1 April 2005 in Journal of Biological Rhythms
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Journal Article
Open access
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JDJ. Dey
J. Dey
ACAmanda-Jayne Francis Carr
Amanda-Jayne Francis Carr
Felino Ramon CagampangFelino Ramon Cagampang
Felino Ramon Cagampang
ASAndrei Semikhodskii
Andrei Semikhodskii
ALA. S. I. Loudon
A. S. I. Loudon
EME. S. Maywood
E. S. Maywood
The hypothalamic suprachiasmatic nuclei (SCN), the principal circadian oscillator in mammals, are synchronized to the solar day by the light-dark cycle, and in turn, they coordinate circadian oscillations in peripheral tissues. The tau mutation in the Syrian hamster is caused by a point mutation leading to a deficiency in the ability of Casein Kinase 1ε to phosphorylate its targets, including circadian PER proteins. How this accelerates circadian period in neural tissues is not known, nor is its impact on peripheral circadian oscillators established. We show that this mutation has no effect on per mRNA expression nor the nuclear accumulation of PER proteins in the SCN. It does, however, accelerate the clearance of PER proteins from the nucleus to an extent sufficient to explain the shortened circadian period of behavioral rhythms. The mutation also has novel, unanticipated consequences for circadian timing in the periphery, including tissue-specific phase advances and/or reduced amplitude of circadian gene expression. The results suggest that the tau mutation accelerates a specific phase, during mid-late subjective night of the SCN circadian feedback loop, rather than cause a global compression of the entire cycle. This reprogrammed output from the clock is associated with peripheral desynchrony, which in turn could account for impaired growth and metabolic efficiency of the mutant.

1 November 2000 in Trends in Genetics
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Journal Article
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ALAndrew S.I. Loudon
Andrew S.I. Loudon
ASAndrei Semikhodskii
Andrei Semikhodskii
SCSusan K. Crosthwaite
Susan K. Crosthwaite