Samsoniella is a very important fungal resource, with some species in the genus having great medical, economic and ecological value. This study reports five new species of Samsoniella from Yunnan Province and Guizhou Province in Southwestern China and Dole Province in Vietnam, providing morphological descriptions, illustrations, phylogenetic placements, associated hosts and comparisons with allied taxa. Based on morphological observations and phylogenetic analyses of combined nrSSU, nrLSU, tef-1α, rpb1 and rpb2 sequence data, it was determined that these five new species were located in the clade of Samsoniella and different from other species of Samsoniella. The five novel species had morphologies similar to those of other species in the genus, with bright orange cylindrical to clavate stromata (gregarious). The fertile part lateral sides usually had a longitudinal ditch without producing perithecia, and superficial perithecia. The phialides had a swollen basal portion, tapering abruptly into a narrow neck and oval or fusiform one-celled conidia, often in chains. The morphological characteristics of 23 species in Samsoniella, including five novel species and 18 known taxa, were also compared in the present study.

The taxonomy and phylogeny of the genus Tolypocladium are herein revised based on the most comprehensive dataset to date. Two species-level phylogenies of Tolypocladium were constructed: a single-gene phylogeny (ITS) of 35 accepted species and a multigene phylogeny (nrSSU, nrLSU, tef-1α, rpb1, and rpb2) of 27 accepted species. Three new species, Tolypocladium pseudoalbum sp. nov., Tolypocladium subparadoxum sp. nov., and Tolypocladium yunnanense sp. nov., are described in the present study. The genetic divergences of four markers (ITS, tef-1α, rpb1 and rpb2) among Tolypocladium species are also reported. The results indicated that species of Tolypocladium were best delimited by rpb1 sequence data, followed by the sequence data for the rpb2, tef-1α, and ITS provided regions. Finally, a key to the 48 accepted species of Tolypocladium worldwide is provided.

The whole genome of Cordyceps pseudotenuipes was sequenced, annotated, and compared with three related species to characterize the genome. The antibiotics and Secondary Metabolites Analysis Shell (antiSMASH) and local BLAST analysis were used to explore the secondary metabolites (SMs) and biosynthesis gene clusters (BGCs) of the genus Cordyceps. The genome-wide basic characteristics of C. pseudotenuipes, C. tenuipes, C. cicadae, and C. militaris revealed unequal genome size, with C. cicadae as the largest (34.11 Mb), followed by C. militaris (32.27 Mb). However, the total gene lengths of C. pseudotenuipes and C. tenuipes were similar (30.1 Mb and 30.06 Mb). The GC contents of C. pseudotenuipes, C. tenuipes, C. cicadae, and C. militaris genomes differed slightly (51.40% to 54.11%). AntiSMASH and local BLAST analysis showed that C. pseudotenuipes, C. tenuipes, C. cicadae, and C. militaris had 31, 28, 31, and 29 putative SM BGCs, respectively. The SM BGCs contained different quantities of polyketide synthetase (PKS), nonribosomal peptide synthetase (NRPS), terpene, hybrid PKS + NRPS, and hybrid NRPS + Other. Moreover, C. pseudotenuipes, C. tenuipes, C. cicadae, and C. militaris had BGCs for the synthesis of dimethylcoprogen. C. pseudotenuipes, C. tenuipes, and C. cicadae had BGCs for the synthesis of leucinostatin A/B, neosartorin, dimethylcoprogen, wortmanamide A/B, and beauvericin. In addition, the SM BGCs unique to C. pseudotenuipes were clavaric acid, communesin, and deoxynivalenol. Synteny analysis indicated that the scaffolds where the SM BGC was located were divided into more than 70 collinear blocks, and there might be rearrangements. Altogether, these findings improved our understanding of the molecular biology of the genus Cordyceps and will facilitate the discovery of new biologically active SMs from the genus Cordyceps using heterologous expression and gene knockdown methods.

The Cordyceps militaris complex, which is a special group in the genus Cordyceps, is rich in species diversity and is widely distributed in nature. Throughout the investigations of arthropod-pathogenic fungi in the national reserves and in Vietnam parks, collections of C. militaris attacking lepidopteran pupae or larvae were located in the soil and on the leaf litter. The phylogenetic analyses of the combined nrSSU, nrLSU, TEF, RPB1, and RPB2 sequence data indicated that the fungal materials collected in Vietnam belonged to C. militaris and two hidden species in the C. militaris complex. The phylogenetic analyses and morphological comparisons presented here strongly supported the descriptions of C. polystromata and C. sapaensis as new taxa as well as C. militaris as a known species. The morphological characteristics of 11 species in the C. militaris complex, which included two novel species and nine known taxa, were also compared.

Based on an integrated taxonomic approach combining multi-locus phylogenetic analysis and morphological characterization, we formally describe and illustrate two new entomopathogenic fungal species from China, Pleurocordyceps longiphialis and Samsoniella aggestitenuipes . Phylogenetic analyses of a six-locus dataset (ITS, nr SSU, nr LSU, tef1-α , rpb1 , and rpb2 ) strongly support the distinct phylogenetic positions of the two new species within their respective genera. Morphologically, P. longiphialis , isolated from a Scarabaeoidea larva, possesses notably elongated α-phialides (9.5–101 µm) and dimorphic conidia. In addition, S. aggestitenuipes , obtained from a lepidopteran pupa, displays synnemata with powdery conidial masses and phialides measuring 6–28 µm. This study also reviews the host ranges and geographic distributions of Pleurocordyceps and Samsoniella . Pleurocordyceps species are known to infect insects in Coleoptera, Hemiptera, and Lepidoptera, and also parasitize fungi such as Elaphomyces , Ophiocordyceps , Paraisaria , and Perennicordyceps . Samsoniella species have been reported from Lepidoptera, Coleoptera, Hymenoptera, and Arachnida. Geographically, Pleurocordyceps occurs in Asia (China, Japan, and Thailand) and South America (Ecuador), while Samsoniella is distributed across East Asia (China, Laos, Thailand, and Vietnam), Europe (UK and Ireland), and South America (Argentina).

Verticillium-like fungi within the Sordariomycetes hold significant ecological and economic importance, especially in biocontrol. This study describes two novel species, Leptobacillium gasaense and Ovicillium yunnanense, and provides DNA sequence data and identification keys for the genera Leptobacillium and Ovicillium. The genus Muscodor, known for its considerable biotechnological value, comprises endophytes characterized by sterile mycelia that produce antibiotic volatile organic compounds (VOCs). Historically, the classification of Muscodor has relied on culture characteristics, VOC chemical profiles, and molecular phylogenetic analyses. However, culture characteristics and VOC profiles lack a definitive diagnostic value. Although asexual morphological traits are crucial for genus-level classification, no conidiogenous structures have been observed in Muscodor. Here, we report the asexual morphological characteristics of Muscodor and describe M. coffeanus as a new record in China, supported by both its asexual morphology and molecular phylogenetic evidence.