Eun Bae Kim

Dr. Eun Bae Kim

orcid

Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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16 April 2018 in Scientific Reports
Verified
Journal Article
Open access
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GHGeon Goo Han
Geon Goo Han
JLJun-Yeong Lee
Jun-Yeong Lee
GJGwi-Deuk Jin
Gwi-Deuk Jin
JPJongbin Park
Jongbin Park
YCYo Han Choi
Yo Han Choi
YCYun Jaie Choi
Yun Jaie Choi
The intestinal microbiota affect various physiological traits of host animals such as brain development, obesity, age, and the immune system. In the swine industry, understanding the relationship between intestinal microbiota and growth stage is essential because growth stage is directly related to the feeding system of pigs, thus we studied the intestinal microbiota of 32 healthy pigs across five sows at 10, 21, 63, 93, and 147 d of ages. The intestinal microbiota were altered with growth of pigs and were separated into three distinct clusters. The relative abundance of several phyla and genera were significantly different between growth stages. We observed co-occurrence pattern of the intestinal microbiota at each growth stage. In addition, we predicted the functions of the intestinal microbiota and confirmed that several KEGG pathways were significantly different between growth stages. We also explored the relationship between the intestinal microbiota and innate factors such as the maternal effect and gender. When pigs were young, innate factors affected on construction of intestinal microbiota, however this tendency was disappeared with growth. Our findings broaden the understanding of microbial ecology, and the results will be used as a reference for investigating host-microbe interactions in the swine industry.

29 June 2016 in SpringerPlus
Verified
Journal Article
Open access
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GHGeon Goo Han
Geon Goo Han
Eun Bae KimEun Bae Kim
Eun Bae Kim
JLJinyoung Lee
Jinyoung Lee
JLJun-Yeong Lee
Jun-Yeong Lee
GJGwideuk Jin
Gwideuk Jin
CKChangsu Kong
Changsu Kong
In the poultry industry, many efforts have been undertaken to further improve the growth performance of broilers and identification and modulation of body weight (BW)-related bacteria could be one of the strategies to improve productivity. However, studies regarding the relationship between microbiota and BW are scarce. The objective of the present study was to investigate the relationship between microbiota and BW in different sections of the gastrointestinal tract (GIT). A total of twenty 18-day-old birds were selected based on the BW, and samples were collected from the three different sections of the GIT, which included the crop, ileum and cecum. Bacterial genomic DNA was extracted from the samples, and the V4 region of 16S rRNA gene were amplified. Amplicons were sequenced on Illumina MiSeq, and microbial communities were analyzed by using QIIME. In principal coordinate analysis, bacterial communities were clustered into three groups, based on the sections of GIT. Several BW-related bacterial groups were identified from linear regression analysis. At the genus level, Streptococcus from the ileum as well as Akkermansia in both ileum and cecum, were negatively related to BW, whereas Bifidobacterium in the ileum and Lactococcus in the cecum showed a positive correlation. The results from the present study showed that particular bacterial communities in the GIT were related to BW, and the study has broadened the understanding of the intestinal microbial ecosystem in broiler chickens.

18 May 2017 in Applied Microbiology and Biotechnology
Verified
Journal Article
Closed access
PDF file
GHGeon Goo Han
Geon Goo Han
JLJun-Yeong Lee
Jun-Yeong Lee
GJGwi-Deuk Jin
Gwi-Deuk Jin
JPJongbin Park
Jongbin Park
YCYo Han Choi
Yo Han Choi
YCYun Jaie Choi
Yun Jaie Choi

1 December 2017 in Microbiological Research
Verified
Journal Article
Closed access
JLJun-Yeong Lee
Jun-Yeong Lee
GHGeon Goo Han
Geon Goo Han
Eun Bae KimEun Bae Kim
Eun Bae Kim
YCYun Jaie Choi
Yun Jaie Choi

22 January 2015 in BMC Genomics
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Journal Article
Open access
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JPJung Youn Park
Jung Youn Park
YAYong-Rock An
Yong-Rock An
NKNaohisa Kanda
Naohisa Kanda
CAChul-Min An
Chul-Min An
HAHye Suck An
Hye Suck An
HKHeebal Kim
Heebal Kim
Whales have captivated the human imagination for millennia. These incredible cetaceans are the only mammals that have adapted to life in the open oceans and have been a source of human food, fuel and tools around the globe. The transition from land to water has led to various aquatic specializations related to hairless skin and ability to regulate their body temperature in cold water. We present four common minke whale (Balaenoptera acutorostrata) genomes with depth of ×13 ~ ×17 coverage and perform resequencing technology without a reference sequence. Our results indicated the time to the most recent common ancestors of common minke whales to be about 2.3574 (95% HPD, 1.1521 – 3.9212) million years ago. Further, we found that genes associated with epilation and tooth-development showed signatures of positive selection, supporting the morphological uniqueness of whales. This whole-genome sequencing offers a chance to better understand the evolutionary journey of one of the largest mammals on earth.

18 September 2013 in Genes & Genomics
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Journal Article
Closed access
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HAHye Suck An
Hye Suck An
JLJang Wook Lee
Jang Wook Lee
WKWoo Jin Kim
Woo Jin Kim
HLHyun Jeong Lim
Hyun Jeong Lim
Eun Bae KimEun Bae Kim
Eun Bae Kim
CAChul Min An
Chul Min An