David Ryan

Prof. David Ryan

orcid

Research Focus & Metrics

Academic Career Length

19Years (2008-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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11 October 2017 in Nature
Verified
Journal Article
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JYJian Yang
Jian Yang
DRDavid Ryan
David Ryan
WWWei Wang
Wei Wang
JTJason Cheuk-Ho Tsang
Jason Cheuk-Ho Tsang
GLGuocheng Lan
Guocheng Lan
PLPentao Liu
Pentao Liu

8 June 2024 in Gut
Verified
Journal Article
Open access
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Marietta IacucciMarietta Iacucci
Marietta Iacucci
Giovanni SantacroceGiovanni Santacroce
Giovanni Santacroce
SMSnehali Majumder
Snehali Majumder
JMJennifer Morael
Jennifer Morael
IZIrene Zammarchi
Irene Zammarchi
SGSubrata Ghosh
Subrata Ghosh
Mounting evidence underscores the pivotal role of the intestinal barrier and its convoluted network with diet and intestinal microbiome in the pathogenesis of inflammatory bowel disease (IBD) and colitis-associated colorectal cancer (CRC). Moreover, the bidirectional association of the intestinal barrier with the liver and brain, known as the gut-brain axis, plays a crucial role in developing complications, including extraintestinal manifestations of IBD and CRC metastasis. Consequently, barrier healing represents a crucial therapeutic target in these inflammatory-dependent disorders, with barrier assessment predicting disease outcomes, response to therapy and extraintestinal manifestations. New advanced technologies are revolutionising our understanding of the barrier paradigm, enabling the accurate assessment of the intestinal barrier and aiding in unravelling the complexity of the gut-brain axis. Cutting-edge endoscopic imaging techniques, such as ultra-high magnification endocytoscopy and probe-based confocal laser endomicroscopy, are new technologies allowing real-time exploration of the cellular intestinal barrier. Additionally, novel advanced spatial imaging technology platforms, including multispectral imaging, upconversion nanoparticles, digital spatial profiling, optical spectroscopy and mass cytometry, enable a deep and comprehensive assessment of the molecular and ultrastructural barrier. In this promising landscape, artificial intelligence plays a pivotal role in standardising and integrating these novel tools, thereby contributing to barrier assessment and prediction of outcomes. Looking ahead, this integrated and comprehensive approach holds the promise of uncovering new therapeutic targets, breaking the therapeutic ceiling in IBD. Novel molecules, dietary interventions and microbiome modulation strategies aim to restore, reinforce, or modulate the gut-brain axis. These advancements have the potential for transformative and personalised approaches to managing IBD.

21 August 2015 in Journal of Clinical Ultrasound
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Journal Article
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FMFiachra Moloney
Fiachra Moloney
DRDavid Ryan
David Ryan
MTMaria Twomey
Maria Twomey
MHMatt Hewitt
Matt Hewitt
JBJosephine Barry
Josephine Barry

7 January 2019 in Nature Protocols
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Journal Article
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JYJian Yang
Jian Yang
DRDavid Ryan
David Ryan
GLGuocheng Lan
Guocheng Lan
XZXiangang Zou
Xiangang Zou
PLPentao Liu
Pentao Liu

30 September 2019 in EMBO Reports
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Journal Article
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JKJihee Kim
Jihee Kim
BLBeatrice Lana
Beatrice Lana
STSilvia Torelli
Silvia Torelli
DRDavid Ryan
David Ryan
FCFrancesco Catapano
Francesco Catapano
YLYung‐Yao Lin
Yung‐Yao Lin
Dystroglycan, an extracellular matrix receptor, has essential functions in various tissues. Loss of α‐dystroglycan‐laminin interaction due to defective glycosylation of α‐dystroglycan underlies a group of congenital muscular dystrophies often associated with brain malformations, referred to as dystroglycanopathies. The lack of isogenic human dystroglycanopathy cell models has limited our ability to test potential drugs in a human‐ and neural‐specific context. Here, we generated induced pluripotent stem cells (iPSCs) from a severe dystroglycanopathy patient with homozygous FKRP (fukutin‐related protein gene) mutation. We showed that CRISPR/Cas9‐mediated gene correction of FKRP restored glycosylation of α‐dystroglycan in iPSC‐derived cortical neurons, whereas targeted gene mutation of FKRP in wild‐type cells disrupted this glycosylation. In parallel, we screened 31,954 small molecule compounds using a mouse myoblast line for increased glycosylation of α‐dystroglycan. Using human FKRP‐iPSC‐derived neural cells for hit validation, we demonstrated that compound 4‐(4‐bromophenyl)‐6‐ethylsulfanyl‐2‐oxo‐3,4‐dihydro‐1H‐pyridine‐5‐carbonitrile (4BPPNit) significantly augmented glycosylation of α‐dystroglycan, in part through upregulation of LARGE1 glycosyltransferase gene expression. Together, isogenic human iPSC‐derived cells represent a valuable platform for facilitating dystroglycanopathy drug discovery and therapeutic development.

16 June 2020 in Insights into Imaging
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Journal Article
Open access
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KJKarl James
Karl James
PDPatrick Duffy
Patrick Duffy
RKRichard G. Kavanagh
Richard G. Kavanagh
BCBrian W. Carey
Brian W. Carey
SPStephen Power
Stephen Power
OOOwen J. O'Connor
Owen J. O'Connor
Objectives: To assess the diagnostic accuracy of fast acquisition MRI in suspected cases of paediatric appendicitis presenting to a tertiary referral hospital. Materials and methods: A prospective study was undertaken between May and October 2017 of 52 children who presented with suspected appendicitis and were referred for an abdominal ultrasound. All patients included in this study received both an abdominal ultrasound and five-sequence MRI consisting of axial and coronal gradient echo T2 scans, fat-saturated SSFSE and a diffusion-weighted scan. Participants were randomised into groups of MRI with breath-holds or MRI with free breathing. A patient satisfaction survey was also carried out. Histopathology findings, where available, were used as a gold standard for the purposes of data analysis. Statistical analysis was performed, and p values < 0.05 were considered statistically significant. Results: Ultrasound had a sensitivity and specificity of 25% and 92.9%, respectively. MRI with breath-hold had a sensitivity and specificity of 81.8% and 66.7%, respectively, whilst MRI with free breathing was superior with sensitivity and specificity of 92.3% and 84.2%, respectively. MRI with free breathing was also more time efficient (p < 0.0001). Group statistics were comparable (p < 0.05). Conclusions: The use of fast acquisition MRI protocols, particularly free breathing sequences, for patients admitted with suspected appendicitis can result in faster diagnosis, treatment and discharge. It also has a statistically significant diagnostic advantage over ultrasound. Additionally, the higher specificity of MR can reduce the number of negative appendectomies performed in tertiary centres.