Mirko Zaffagnini

Prof. Mirko Zaffagnini

Department of Pharmacy and Biotechnology, Alma Mater Studiorum University of Bologna, Bologna, Italy
orcid

Research Focus & Metrics

Academic Career Length

23Years (2004-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
1 January 2013 in Frontiers in Plant Science
Verified
Journal Article
Open access
PDF file
LMLaure Michelet
Laure Michelet
Mirko ZaffagniniMirko Zaffagnini
Mirko Zaffagnini
SMSamuel Morisse
Samuel Morisse
FSFrancesca Sparla
Francesca Sparla
MPMaria Esther Perez-Perez
Maria Esther Perez-Perez
Stephane LemaireStephane Lemaire
Stephane Lemaire
Reversible redox post-translational modifications such as oxido-reduction of disulfide bonds, S-nitrosylation and S-glutathionylation, play a prominent role in the regulation of cell metabolism and signaling in all organisms. These modifications are mainly controlled by members of the thioredoxin and glutaredoxin families. Early studies in photosynthetic organisms have identified the Calvin-Benson cycle, the photosynthetic pathway responsible for carbon assimilation, as a redox regulated process. Indeed, 4 out of 11 enzymes of the cycle were shown to have a low activity in the dark and to be activated in the light through thioredoxin-dependent reduction of regulatory disulfide bonds. The underlying molecular mechanisms were extensively studied at the biochemical and structural level. Unexpectedly, recent biochemical and proteomic studies have suggested that all enzymes of the cycle and several associated regulatory proteins may undergo redox regulation through multiple redox post-translational modifications including glutathionylation and nitrosylation. The aim of this review is to detail the well-established mechanisms of redox regulation of Calvin-Benson cycle enzymes as well as the most recent reports indicating that this pathway is tightly controlled by multiple interconnected redox post-translational modifications. This redox control is likely allowing fine tuning of the Calvin-Benson cycle required for adaptation to varying environmental conditions, especially during responses to biotic and abiotic stresses.

1 January 2013 in Frontiers in Plant Science
Verified
Journal Article
Open access
PDF file
Mirko ZaffagniniMirko Zaffagnini
Mirko Zaffagnini
Simona FermaniSimona Fermani
Simona Fermani
ACAlex Costa
Alex Costa
Stephane LemaireStephane Lemaire
Stephane Lemaire
PTPaolo Trost
Paolo Trost
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) is a ubiquitous enzyme involved in glycolysis and shown, particularly in animal cells, to play additional roles in several unrelated non-metabolic processes such as control of gene expression and apoptosis. This functional versatility is regulated, in part at least, by redox post-translational modifications that alter GAPDH catalytic activity and influence the subcellular localization of the enzyme. In spite of the well established moonlighting (multifunctional) properties of animal GAPDH, little is known about non-metabolic roles of GAPDH in plants. Plant cells contain several GAPDH isoforms with different catalytic and regulatory properties, located both in the cytoplasm and in plastids, and participating in glycolysis and the Calvin-Benson cycle. A general feature of all GAPDH proteins is the presence of an acidic catalytic cysteine in the active site that is overly sensitive to oxidative modifications, including glutathionylation and S-nitrosylation. In Arabidopsis, oxidatively modified cytoplasmic GAPDH has been successfully used as a tool to investigate the role of reduced glutathione, thioredoxins and glutaredoxins in the control of different types of redox post-translational modifications. Oxidative modifications inhibit GAPDH activity, but might enable additional functions in plant cells. Mounting evidence support the concept that plant cytoplasmic GAPDH may fulfill alternative, non-metabolic functions that are triggered by redox post-translational modifications of the protein under stress conditions. The aim of this review is to detail the molecular mechanisms underlying the redox regulation of plant cytoplasmic GAPDH in the light of its crystal structure, and to provide a brief inventory of the well known redox-dependent multi-facetted properties of animal GAPDH, together with the emerging roles of oxidatively modified GAPDH in stress signaling pathways in plants.

13 April 2007 in Current Genetics
Verified
Journal Article
Closed access
PDF file
Stephane LemaireStephane Lemaire
Stephane Lemaire
LMLaure Michelet
Laure Michelet
Mirko ZaffagniniMirko Zaffagnini
Mirko Zaffagnini
VMVincent Massot
Vincent Massot
EIEmmanuelle Issakidis-Bourguet
Emmanuelle Issakidis-Bourguet

8 November 2005 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Closed access
LMLaure Michelet
Laure Michelet
Mirko ZaffagniniMirko Zaffagnini
Mirko Zaffagnini
CMChristophe MARCHAND
Christophe MARCHAND
VCValérie Collin
Valérie Collin
PDPaulette Decottignies
Paulette Decottignies
Stephane LemaireStephane Lemaire
Stephane Lemaire
Thioredoxin f (TRXf) is a key factor in the redox regulation of chloroplastic carbon fixation enzymes, whereas glutathione is an important thiol buffer whose status is modulated by stress conditions. Here, we report specific glutathionylation of TRXf. A conserved cysteine is present in the TRXf primary sequence, in addition to its two active-site cysteines. The additional cysteine becomes glutathionylated when TRXf is exposed to oxidized glutathione or to reduced glutathione plus oxidants. No other chloroplastic TRX, from either Arabidopsis or Chlamydomonas , is glutathionylated under these conditions. Glutathionylation decreases the ability of TRXf to be reduced by ferredoxin-thioredoxin reductase and results in impaired light activation of target enzymes in a reconstituted thylakoid system. Although several mammalian proteins undergoing glutathionylation have already been identified, TRXf is among the first plant proteins found to undergo this posttranslational modification. This report suggests that a crosstalk between the TRX and glutathione systems mediates a previously uncharacterized form of redox signaling in plants in stress conditions.

15 March 2012 in Antioxidants & Redox Signaling
Verified
Journal Article
Closed access
Mirko ZaffagniniMirko Zaffagnini
Mirko Zaffagnini
MBMariette Bedhomme
Mariette Bedhomme
CMChristophe MARCHAND
Christophe MARCHAND
SMSamuel Morisse
Samuel Morisse
PTPaolo Trost
Paolo Trost
Stephane LemaireStephane Lemaire
Stephane Lemaire
Significance: In photosynthetic organisms, besides the well-established disulfide/dithiol exchange reactions specifically controlled by thioredoxins (TRXs), protein S-glutathionylation is emerging as an alternative redox modification occurring under stress conditions. This modification, consisting of the formation of a mixed disulfide between glutathione and a protein cysteine residue, can not only protect specific cysteines from irreversible oxidation but also modulate protein activities and appears to be specifically controlled by small disulfide oxidoreductases of the TRX superfamily named glutaredoxins (GRXs). Recent Studies: In recent times, several studies allowed significant progress in this area, mostly due to the identification of several plant proteins undergoing S-glutathionylation and to the characterization of the molecular mechanisms and the proteins involved in the control of this modification. Critical Issues: This article provides a global overview of protein glutathionylation in photosynthetic organisms with particular emphasis on the mechanisms of protein glutathionylation and deglutathionylation and a focus on the role of GRXs. Then, we describe the methods employed for identification of glutathionylated proteins in photosynthetic organisms and review the targets and the possible physiological functions of protein glutathionylation. Future Directions: In order to establish the importance of protein S-glutathionylation in photosynthetic organisms, future studies should be aimed at delineating more accurately the molecular mechanisms of glutathionylation and deglutathionylation reactions, at identifying proteins undergoing S-glutathionylation in vivo under diverse conditions, and at investigating the importance of redoxins, GRX, and TRX, in the control of this redox modification in vivo. Antioxid. Redox Signal. 16, 567–586.

1 March 2009 in Molecular Plant
Verified
Journal Article
Open access
PDF file
LMLucia Marri
Lucia Marri
Mirko ZaffagniniMirko Zaffagnini
Mirko Zaffagnini
VCValérie Collin
Valérie Collin
EIEmmanuelle Issakidis-Bourguet
Emmanuelle Issakidis-Bourguet
Stephane LemaireStephane Lemaire
Stephane Lemaire
PTPaolo Trost
Paolo Trost
The Calvin cycle enzymes glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK) can form under oxidizing conditions a supramolecular complex with the regulatory protein CP12. Both GAPDH and PRK activities are inhibited within the complex, but they can be fully restored by reduced thioredoxins (TRXs). We have investigated the interactions of eight different chloroplast thioredoxin isoforms (TRX f1, m1, m2, m3, m4, y1, y2, x) with GAPDH (A4, B4, and B8 isoforms), PRK and CP12 (isoform 2), all from Arabidopsis thaliana. In the complex, both A4-GAPDH and PRK were promptly activated by TRX f1, or more slowly by TRXs m1 and m2, but all other TRXs were ineffective. Free PRK was regulated by TRX f1, m1, or m2, while B4- and B8-GAPDH were absolutely specific for TRX f1. Interestingly, reductive activation of PRK caged in the complex was much faster than reductive activation of free oxidized PRK, and activation of A4-GAPDH in the complex was much faster (and less demanding in terms of reducing potential) than activation of free oxidized B4- or B8-GAPDH. It is proposed that CP12-assembled supramolecular complex may represent a reservoir of inhibited enzymes ready to be released in fully active conformation following reduction and dissociation of the complex by TRXs upon the shift from dark to low light. On the contrary, autonomous redox-modulation of GAPDH (B-containing isoforms) would be more suited to conditions of very active photosynthesis.