Indonesia plays a dominant role in the global refined palm oil (RPO) supply chain. Given the increasing global emphasis on carbon neutrality and sustainable trade, understanding the carbon footprint of Indonesian RPO and its embodied carbon emissions (ECE) in global trade is essential for identifying mitigation opportunities and aligning with international sustainability standards. This study integrates life cycle assessment and trade data to quantify the carbon footprint of RPO products and analyze the spatiotemporal patterns of trade-related ECE. Results show that producing 1 ton of RPO emits 2196.84 kg CO₂e, with wastewater treatment (57.67%) and land use change (32.82%) as the main contributors. From 2010 to 2022, ECE induced by RPO exports rose from 35.79 Mt CO₂e to 54.94 Mt CO₂e (3.64% annual growth). Major ECE importers were India, China, and Pakistan, accounting for 20.36%, 14.29%, and 11.45% of Indonesia’s total trade-related ECE, respectively. Comprehensive sensitivity and uncertainty analyses conducted on key parameters confirmed the robustness of the above results. Based on these robust findings, integrated mitigation strategies targeting both production optimization and sustainable trade mechanisms are proposed to accelerate Indonesia’s RPO industry decarbonization.