Accurate pixel-level segmentation of small and complex cracks in hydraulic concrete structures is essential for automated inspection and quantitative condition assessment of civil infrastructure. However, reliable deep learning-based crack segmentation remains challenging due to the limited availability of pixel-level annotated hydraulic concrete images and the substantial domain discrepancy between public crack datasets and UAV-acquired hydraulic imagery. To address these challenges, this study constructs a multi-source infrastructure crack database(MICD) by integrating six publicly available crack datasets from heterogeneous infrastructure scenarios. MICD provides diverse prior knowledge of crack texture, boundary characteristics, morphological connectivity, topological patterns, and background interference for transferable representation learning. Based on MICD, a multi-source deep transfer learning framework, termed MSDT-Mask2Former, is developed for fine-grained hydraulic concrete crack segmentation. A Mask2Former architecture with a Swin-Large backbone is pretrained on the multi-source database and subsequently adapted to the hydraulic concrete domain through progressive target-domain fine-tuning. Morphology-sensitive dense point supervision is introduced to enhance the representation of thin, fragmented, weak-contrast, and boundary-ambiguous cracks, while source-centered L2-SP regularization is further investigated for knowledge preservation. On the fixed hydraulic concrete crack test set, the proposed method achieves a Dice score of 81.55%, a crack IoU of 68.85%, an mIoU of 84.12%, a Boundary IoU of 68.30%, and a clDice score of 86.62%. Compared with the architecture-matched target-only Mask2Former, the proposed framework improves Dice and mIoU by 0.31 and 0.22 percentage points, respectively, while increasing recall from 80.16% to 81.70%. Furthermore, it reduces the image-space crack geometry estimation errors of crack area, skeleton length, mean width, and connected-component count by 37.11%, 49.50%, 17.85%, and 41.83%, respectively, compared with U-Net. The proposed framework provides an effective solution for fine-grained crack segmentation and morphology-preserving quantitative assessment of hydraulic concrete structures under UAV-based inspection scenarios.