Cagman Tan

Dr. Cagman Tan

orcid

Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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5 August 2021 in Clinical and Experimental Immunology
Verified
Journal Article
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IYIsmail Yaz
Ismail Yaz
BOBegum Ozbek
Begum Ozbek
HBHacer Neslihan Bildik
Hacer Neslihan Bildik
CTCagman Tan
Cagman Tan
SHSevil Oskay Halaçlı
Sevil Oskay Halaçlı
ITIlhan Tezcan
Ilhan Tezcan
Leukocyte adhesion deficiency type I is a rare primary immunodeficiency disorder characterized by mutations in the ITGB2 gene encoding CD18. We present clinical and immunological features of 15 patients with leukocyte adhesion deficiency type 1 (LAD-1). Targeted next-generation sequencing was performed with either a primary immunodeficiency gene panel comprising 266 genes or a small LAD-panel consisting of five genes for genetic analysis. To measure the expression level of integrins on the leukocyte surface, flow cytometry analysis was performed. The median age of the patients at diagnosis was 3 (1–48) months. Eleven (73%) of the 15 patients had a LAD-1 diagnosis in their first 6 months and 14 (93%) patients had consanguineous parents. Delayed separation of the umbilical cord was present in 80% (n = 12) of the patients in our cohort, whereas omphalitis was observed in 53% (n = 8) of the patients. Leukocytosis with neutrophil predominance was observed in 73% (n = 11) patients. Nine distinct variants in the ITGB2 gene in 13 of the 15 patients with LAD-1 were characterized, two of which (c.305_306delAA and c.779_786dup) are novel homozygous mutations of ITGB2. Four unrelated patients from Syria had a novel c.305_306delAA mutation that might be a founder effect for patients of Syrian origin. Four (27%) patients underwent hematopoietic stem cell transplantation. Two patients died because of HSCT complications and the other two are alive and well. Early differential diagnosis of the patients is critical in the management of the disease and genetic evaluation provides a basis for family studies and genetic counseling.

14 October 2022 in International Ophthalmology
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Journal Article
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ABAhmet Alp Bilgiç
Ahmet Alp Bilgiç
SKSibel Kocabeyoglu
Sibel Kocabeyoglu
ODOzlem Dikmetas
Ozlem Dikmetas
CTCagman Tan
Cagman Tan
JKJale Karakaya
Jale Karakaya
MIMurat Irkec
Murat Irkec

19 April 2018 in Journal of Cosmetic Dermatology
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Journal Article
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GAGulsen Akoglu
Gulsen Akoglu
CTCagman Tan
Cagman Tan
DCDeniz Cagdas
Deniz Cagdas
ITIlhan Tezcan
Ilhan Tezcan

2 December 2020 in Immunological Investigations
Verified
Journal Article
Closed access
MSMerve Süleyman
Merve Süleyman
CTCagman Tan
Cagman Tan
AUAysegul Uner
Aysegul Uner
ÇIÇağkan İnkaya
Çağkan İnkaya
SASelin Aytaç
Selin Aytaç
DCDeniz Cagdas
Deniz Cagdas
Deficiency of adenosine deaminase type 2 (DADA2) is an autoinflammatory disease characterized with immunologic, hematologic, and neurological features. Here, we presented two patients with severe persistent chronic neutropenia, which required differential diagnosis of congenital and autoimmune neutropenia, myelodysplastic syndrome (MDS), and primary immunodeficiency diseases, including autoimmune lymphoproliferative disease. The therapy of the disease except hematopoietic stem cell transplantation is a challenging experience.

9 February 2020 in Scandinavian Journal of Immunology
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Journal Article
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BKBetül Karaatmaca
Betül Karaatmaca
DCDeniz Cagdas
Deniz Cagdas
CTCagman Tan
Cagman Tan
SASelin Aytaç
Selin Aytaç
BÖBegüm Özbek
Begüm Özbek
ITİlHan Tezcan
İlHan Tezcan

23 April 2025 in Children
Verified
Journal Article
Open access
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DGDuygu Demirtaş Güner
Duygu Demirtaş Güner
HBHacer Neslihan Bildik
Hacer Neslihan Bildik
HDHulya Demir
Hulya Demir
DCDeniz Cagdas
Deniz Cagdas
ITInci Nur Saltik Temizel
Inci Nur Saltik Temizel
ITIlhan Tezcan
Ilhan Tezcan
Background/Objectives: This study aims to identify genetic variants associated with early-onset inflammatory bowel disease (IBD) and to improve diagnostic and therapeutic approaches. In selected monogenic IBD cases, treatment included colchicine, interleukin-1 inhibitors, and hematopoietic stem cell transplantation. Methods: This study included patients with early-onset IBD, defined as IBD diagnosed before the age of 10, who were under follow-up at the Department of Pediatric Gastroenterology, Hacettepe University, and agreed to participate between December 2018 and April 2021. Whole-exome sequencing (WES) was performed prospectively in patients without a prior diagnosis of monogenic disease, while clinical and laboratory data were reviewed retrospectively. Identified variants were evaluated for pathogenicity using standard bioinformatics tools. Results: A total of 47 patients were enrolled, including 33 boys (70.2%) and 14 girls (29.8%). The median age at symptom onset was 36 months (IQR: 10–72), and the median age at diagnosis was 3.7 years (IQR: 1.5–7.6). Crohn’s disease was diagnosed in 53.2% (n = 25), ulcerative colitis in 38.3% (n = 18), and unclassified IBD in 8.5% (n = 4). Monogenic IBD was identified in 36.2% (n = 17) of patients, including nine with Familial Mediterranean Fever and others with glycogen storage disease type 1b (n = 2), XIAP deficiency, chronic granulomatous disease, DOCK8 deficiency, IL10 receptor alpha defect, LRBA deficiency, and NFKB2 deficiency (n = 1 each). A novel SLC29A3 gene variant (c.480_481delTGinsCA, p.V161I) (transcript ID: ENST00000479577.2) was identified in 76.6% (n = 36) of patients. Conclusions: This study underscores the importance of genetic variants in early-onset IBD, particularly MEFV and the novel NFKB2. The frequent detection of the SLC29A3 variant may suggest its potential involvement in the pathogenesis of the disease.