Javier Tognarelli

Mr. Javier Tognarelli

orcid

Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
29 March 2020 in Journal of Medical Virology
Verified
Journal Article
Open access
PDF file
ACAndrés E. Castillo
Andrés E. Castillo
BPBárbara Parra
Bárbara Parra
PTPaz Tapia
Paz Tapia
AAAlejandra Acevedo
Alejandra Acevedo
JLJaime Lagos
Jaime Lagos
JFJorge Fernández
Jorge Fernández
The current pandemic caused by the new coronavirus is a worldwide public health concern. To aboard this emergency, and like never before, scientific groups around the world have been working in a fast and coordinated way to get the maximum of information about this virus when it has been almost 3 months since the first cases were detected in Wuhan province in China. The complete genome sequences of around 450 isolates are available, and studies about similarities and differences among them and with the close related viruses that caused similar epidemics in this century. In this work, we studied the complete genome of the first four cases of the new coronavirus disease in Chile, from patients who traveled to Europe and Southeast Asia. Our findings reveal at least two different viral variants entries to Chilean territory, coming from Europe and Asia. We also sub‐classified the isolates into variants according to punctual mutations in the genome. Our work contributes to global information about transmission dynamics and the importance to take control measures to stop the spread of the infection.

21 June 2011 in Archives of Virology
Verified
Journal Article
Closed access
PDF file
JFJorge Fernández
Jorge Fernández
LVL. Vera
L. Vera
JTJavier Tognarelli
Javier Tognarelli
RFR. Fasce
R. Fasce
PAP. Araya
P. Araya
JMJ. Mora
J. Mora

16 January 2026 in Metabolites
Verified
Journal Article
Open access
PDF file
ARAngela Constanza Rojas-Coll
Angela Constanza Rojas-Coll
JVJosé-Ignacio Valencia
José-Ignacio Valencia
JTJavier Tognarelli
Javier Tognarelli
GBGuillermo Fernández Bunster
Guillermo Fernández Bunster
Background: Endolichenic fungi represent an emerging source of bioactive secondary metabolites; however, the genomic basis of their chemical diversity remains largely poorly characterized. Specifically, the metabolic capabilities of Cladosporium limoniforme have not been explored at the genomic level. Objectives: This study aimed to characterize the biosynthetic potential of C. limoniforme by presenting its first whole-genome sequence and conducting a comparative analysis of its biosynthetic gene clusters (BGCs), with a specific focus on the evolutionary conservation of the DHN-melanin pathway. Methods: Genome mining was performed using antiSMASH and fungiSMASH tools. Comparative genomics involved heatmap-based distribution analysis across the Cladosporium genus, synteny profiling using Clinker to assess gene order conservation, and Maximum Likelihood phylogenetic analysis of the polyketide synthase (T1PKS) domain. Results: We identified 26 putative BGCs, revealing a largely untapped metabolic repertoire. Comparative analysis demonstrated a high degree of conservation for the metachelin C (siderophore) and 1,3,6,8-tetrahydroxynaphthalene (T4HN) clusters across the genus. Notably, synteny and phylogenetic analyses showed that while C. limoniforme retains a conserved, ancestral T1PKS core essential for stress survival, it exhibits a significant reduction in accessory genes compared to plant-pathogenic congeners. Conclusions: These findings support a “metabolic streamlining” hypothesis driven by the endolichenic lifestyle, where the fungus retains essential protective machinery while shedding costly accessory genes unnecessary in the buffered lichen niche. This study establishes C. limoniforme as a valuable genomic resource for future biotechnological research.