Yi Chen

Prof. Yi Chen


Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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13 August 2022 in Signal Transduction and Targeted Therapy
Verified
Journal Article
Open access
PDF file
FPFu Peng
Fu Peng
MLMinru Liao
Minru Liao
RQRui Qin
Rui Qin
SZShiou Zhu
Shiou Zhu
CPCheng Peng
Cheng Peng
BHBo Han
Bo Han
Regulated cell death (RCD), also well-known as programmed cell death (PCD), refers to the form of cell death that can be regulated by a variety of biomacromolecules, which is distinctive from accidental cell death (ACD). Accumulating evidence has revealed that RCD subroutines are the key features of tumorigenesis, which may ultimately lead to the establishment of different potential therapeutic strategies. Hitherto, targeting the subroutines of RCD with pharmacological small-molecule compounds has been emerging as a promising therapeutic avenue, which has rapidly progressed in many types of human cancers. Thus, in this review, we focus on summarizing not only the key apoptotic and autophagy-dependent cell death signaling pathways, but the crucial pathways of other RCD subroutines, including necroptosis, pyroptosis, ferroptosis, parthanatos, entosis, NETosis and lysosome-dependent cell death (LCD) in cancer. Moreover, we further discuss the current situation of several small-molecule compounds targeting the different RCD subroutines to improve cancer treatment, such as single-target, dual or multiple-target small-molecule compounds, drug combinations, and some new emerging therapeutic strategies that would together shed new light on future directions to attack cancer cell vulnerabilities with small-molecule drugs targeting RCD for therapeutic purposes.

1 January 2020 in Theranostics
Verified
Journal Article
Open access
JZJin Zhang
Jin Zhang
HXHonggang Xiang
Honggang Xiang
JLJie Liu
Jie Liu
YCYi Chen
Yi Chen
RHRong-Rong He
Rong-Rong He
BLBo Liu
Bo Liu
Sirtuin 3 (SIRT3) is one of the most prominent deacetylases that can regulate acetylation levels in mitochondria, which are essential for eukaryotic life and inextricably linked to the metabolism of multiple organs. Hitherto, SIRT3 has been substantiated to be involved in almost all aspects of mitochondrial metabolism and homeostasis, protecting mitochondria from a variety of damage. Accumulating evidence has recently documented that SIRT3 is associated with many types of human diseases, including age-related diseases, cancer, heart disease and metabolic diseases, indicating that SIRT3 can be a potential therapeutic target. Here we focus on summarizing the intricate mechanisms of SIRT3 in human diseases, and recent notable advances in the field of small-molecule activators or inhibitors targeting SIRT3 as well as their potential therapeutic applications for future drug discovery.

8 March 2023 in Cell Host & Microbe
Verified
Journal Article
Closed access
XZXusheng Zhang
Xusheng Zhang
DYDou Yu
Dou Yu
DWDi Wu
Di Wu
XGXintong Gao
Xintong Gao
FSFei Shao
Fei Shao
Shuo WangShuo Wang
Shuo Wang

1 February 2021 in Acta Pharmaceutica Sinica B
Verified
Journal Article
Open access
TJTingting Jiang
Tingting Jiang
GWGuan Wang
Guan Wang
YLYao Liu
Yao Liu
LFLu Feng
Lu Feng
MWMeng Wang
Meng Wang
LOLiang Ouyang
Liang Ouyang
Tropomyosin receptor kinase A, B and C (TRKA, TRKB and TRKC), which are well-known members of the cell surface receptor tyrosine kinase (RTK) family, are encoded by the neurotrophic receptor tyrosine kinase 1, 2 and 3 (NTRK1, NTRK2 and NTRK3) genes, respectively. TRKs can regulate cell proliferation, differentiation and even apoptosis through the RAS/MAPKs, PI3K/AKT and PLCγ pathways. Gene fusions involving NTRK act as oncogenic drivers of a broad diversity of adult and pediatric tumors, and TRKs have become promising antitumor targets. Therefore, achieving a comprehensive understanding of TRKs and relevant TRK inhibitors should be urgently pursued for the further development of novel TRK inhibitors for potential clinical applications. This review focuses on summarizing the biological functions of TRKs and NTRK fusion proteins, the development of small-molecule TRK inhibitors with different chemotypes and their activity and selectivity, and the potential therapeutic applications of these inhibitors for future cancer drug discovery efforts.

5 September 2024 in STAR Protocols
Verified
Journal Article
Open access
QDQiang Du
Qiang Du
RZRui Zhao
Rui Zhao
QWQianyi Wan
Qianyi Wan
SLSiyu Li
Siyu Li
HLHuanyu Li
Huanyu Li
DSDan Shan
Dan Shan
Here, we present a protocol for conducting bibliometric analysis in biomedicine using CiteSpace and VOSviewer. We describe the steps for extracting data from Web of Science, data cleaning, and preprocessing. We then detail procedures for identifying research trends and collaboration networks by visualizing data with CiteSpace; mapping co-authorship, co-citation, and keyword co-occurrence using VOSviewer; and analyzing highly cited literature to identify key publications and trends. Finally, we outline techniques for interpreting the visualizations to draw meaningful conclusions about the research landscape. For complete details on the use and execution of this protocol, please refer to Li et al.1.

5 February 2022 in Journal of Hematology & Oncology
Verified
Journal Article
Open access
PDF file
RZRongyan Zhao
Rongyan Zhao
JFJiahui Fu
Jiahui Fu
LZLingjuan Zhu
Lingjuan Zhu
YCYi Chen
Yi Chen
BLBo Liu
Bo Liu
Non-coding RNAs (ncRNAs) have been defined as a class of RNA molecules transcribed from the genome but not encoding proteins, such as microRNAs, long non-coding RNAs, Circular RNAs, and Piwi-interacting RNAs. Accumulating evidence has recently been revealing that ncRNAs become potential druggable targets for regulation of several small-molecule compounds, based on their complex spatial structures and biological functions in cancer therapy. Thus, in this review, we focus on summarizing some new emerging designing strategies, such as high-throughput screening approach, small-molecule microarray approach, structure-based designing approach, phenotypic screening approach, fragment-based designing approach, and pharmacological validation approach. Based on the above-mentioned approaches, a series of representative small-molecule compounds, including Bisphenol-A, Mitoxantrone and Enoxacin have been demonstrated to modulate or selectively target ncRNAs in different types of human cancers. Collectively, these inspiring findings would provide a clue on developing more novel avenues for pharmacological modulations of ncRNAs with small-molecule drugs for future cancer therapeutics.