Adam Cotty

Dr. Adam Cotty

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Research Focus & Metrics

Academic Career Length

21Years (2006-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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22 October 2015 in PLOS ONE
Verified
Journal Article
Open access
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BTBrian Tomkowicz
Brian Tomkowicz
EWEileen Walsh
Eileen Walsh
ACAdam Cotty
Adam Cotty
RVRaluca Verona
Raluca Verona
NSNina Sabins
Nina Sabins
TMTimothy McCabe
Timothy McCabe
TIM-3 (T cell immunoglobulin and mucin-domain containing protein 3) is a member of the TIM family of proteins that is preferentially expressed on Th1 polarized CD4+ and CD8+ T cells. Recent studies indicate that TIM-3 serves as a negative regulator of T cell function (i.e. T cell dependent immune responses, proliferation, tolerance, and exhaustion). Despite having no recognizable inhibitory signaling motifs, the intracellular tail of TIM-3 is apparently indispensable for function. Specifically, the conserved residues Y265/Y272 and surrounding amino acids appear to be critical for function. Mechanistically, several studies suggest that TIM-3 can associate with interleukin inducible T cell kinase (ITK), the Src kinases Fyn and Lck, and the p85 phosphatidylinositol 3-kinase (PI3K) adaptor protein to positively or negatively regulate IL-2 production via NF-κB/NFAT signaling pathways. To begin to address this discrepancy, we examined the effect of TIM-3 in two model systems. First, we generated several Jurkat T cell lines stably expressing human TIM-3 or murine CD28-ECD/human TIM-3 intracellular tail chimeras and examined the effects that TIM-3 exerts on T cell Receptor (TCR)-mediated activation, cytokine secretion, promoter activity, and protein kinase association. In this model, our results demonstrate that TIM-3 inhibits several TCR-mediated phenotypes: i) NF-kB/NFAT activation, ii) CD69 expression, and iii) suppression of IL-2 secretion. To confirm our Jurkat cell observations we developed a primary human CD8+ cell system that expresses endogenous levels of TIM-3. Upon TCR ligation, we observed the loss of NFAT reporter activity and IL-2 secretion, and identified the association of Src kinase Lck, and PLC-γ with TIM-3. Taken together, our results support the conclusion that TIM-3 is a negative regulator of TCR-function by attenuating activation signals mediated by CD3/CD28 co-stimulation.

29 July 2013 in Alcohol, Clinical and Experimental Research
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Journal Article
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RSRuchi Shah
Ruchi Shah
KRKarina Reyes-Gordillo
Karina Reyes-Gordillo
JAJaime Arellanes-Robledo
Jaime Arellanes-Robledo
CLCarmen G. Lechuga
Carmen G. Lechuga
ZHZamira Hernández-Nazara
Zamira Hernández-Nazara
MLM. Raj Lakshman
M. Raj Lakshman

1 December 2006 in American Journal of Physiology-Gastrointestinal and Liver Physiology
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Journal Article
Closed access
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CLCarmen G. Lechuga
Carmen G. Lechuga
ZHZamira H. Hernández-Nazara
Zamira H. Hernández-Nazara
EHElizabeth Hernández
Elizabeth Hernández
MBMarcia Bustamante
Marcia Bustamante
GDGregory Desierto
Gregory Desierto
MRMarcos Rojkind
Marcos Rojkind
Increased expression of PDGF-β receptors is a landmark of hepatic stellate cell activation and transdifferentiation into myofibroblasts. However, the molecular mechanisms that regulate the fate of the receptor are lacking. Recent studies suggested that N-acetylcysteine enhances the extracellular degradation of PDGF-β receptor by cathepsin B, thus suggesting that the absence of PDGF-β receptors in quiescent cells is due to an active process of elimination and not to a lack of expression. In this communication we investigated further molecular mechanisms involved in PDGF-β receptor elimination and reappearance after incubation with PDGF-BB. We showed that in culture-activated hepatic stellate cells there is no internal protein pool of receptor, that the protein is maximally phosphorylated by 5 min and completely degraded after 1 h by a lysosomal-dependent mechanism. Inhibition of receptor autophosphorylation by tyrphostin 1296 prevented its degradation, but several proteasomal inhibitors had no effect. We also showed that receptor reappearance is time and dose dependent, being more delayed in cells treated with 50 ng/ml (48 h) compared with 10 ng/ml (24 h).

1 October 2007 in Protein Expression and Purification
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Journal Article
Closed access
JCJill M. Carton
Jill M. Carton
TSTina Sauerwald
Tina Sauerwald
PHPam Hawley-Nelson
Pam Hawley-Nelson
BMBarry Morse
Barry Morse
NPNancy Peffer
Nancy Peffer
RSRay Sweet
Ray Sweet

30 June 2025 in Cells
Verified
Journal Article
Open access
PDF file
KCKamila Czechowska
Kamila Czechowska
DBDiana L Bonilla
Diana L Bonilla
ACAdam Cotty
Adam Cotty
ADAmay Dankar
Amay Dankar
PMPaul E. Mead
Paul E. Mead
VNVeronica Nash
Veronica Nash
Spectral flow cytometry has revolutionized traditional single-cell profiling to a new era of high-dimensional analysis, allowing for unprecedented deep phenotyping and more precise cell characterization, thereby significantly enhancing our multiplexing capability. The recent application of this technology in clinical settings has been redefining the landscape of clinical diagnostic panels and immune monitoring, particularly for hematologic malignancies, immunological disorders, and drug discovery. Emerging technologies like ghost cytometry, LASE, and imaging flow cytometry are advancing cytometry by improving sensitivity, throughput, and spatial resolution. In this review, we discuss the requirements, challenges, and considerations for spectral applications in clinical diagnostic laboratories and pharmaceutical/contract research organization (CRO) settings. We discuss how these recent innovations are set to push the boundaries of diagnostic accuracy and analytical power, heralding a new frontier in clinical cytometry with the potential to dramatically enhance patient care and treatment outcomes.

1 April 2011 in Hybridoma
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Journal Article
Closed access
NFNatalie Fursov
Natalie Fursov
EJErin Johnston
Erin Johnston
KDKaren Duffy
Karen Duffy
ACAdam Cotty
Adam Cotty
TPTheodore Petley
Theodore Petley
GPGordon Powers
Gordon Powers
ST2L is a transmembrane receptor that belongs to the IL-1 receptor family. The receptor is expressed on various cell types including Th2 cells, mast cells, basophils, growth-activated fibroblasts, and vascular endothelial cells. ST2L activation by its ligand IL-33 has been implicated in Th2-mediated immunity, inflammation, and allergic responses in vivo. Inhibition of ST2L activity can attenuate Th2-dominated immune responses such as lung eosinophilia, airway hyper-responsiveness, and arthritis in animal models. Here we report the generation and in vitro characterization of a panel of rat anti-mouse ST2L monoclonal antibodies. We demonstrate that the antibodies specifically bind to recombinant receptor protein and that a subset of the binders inhibits mouse ST2L activity in multiple in vitro assays. Four of the identified anti-mouse ST2L antibodies were shown to prevent IL-33 from binding to ST2L, down-regulate IL-33-induced NF-κB signaling, and neutralize the ability of IL-33 to stimulate mouse Th2 cell proliferation. The characterized monoclonal antibodies are important tools that will be used to study mouse ST2L receptor functionality in vivo.