Phillip Kyriakakis

Dr. Phillip Kyriakakis

orcid

Research Focus & Metrics

Academic Career Length

19Years (2008-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
21 February 2020 in Science Advances
Verified
Journal Article
Open access
PDF file
ZHZiliang Huang
Ziliang Huang
YWYiqian Wu
Yiqian Wu
MAMolly E. Allen
Molly E. Allen
YPYijia Pan
Yijia Pan
PKPhillip Kyriakakis
Phillip Kyriakakis
YWYingxiao Wang
Yingxiao Wang
Light-sensitive regulators were engineered to control genetic induction of CAR expression in T cells for cancer immunotherapy.

30 July 2008 in Fly
Verified
Journal Article
Closed access
PKPhillip Kyriakakis
Phillip Kyriakakis
MTMarla Tipping
Marla Tipping
LALouka Abed
Louka Abed
AVAlexey Veraksa
Alexey Veraksa
Tandem affinity purification (TAP) has been widely used for the analysis of protein complexes. We investigated the parameters of the recently developed TAP method (GS-TAP) and its application in Dr...

8 November 2010 in Biomacromolecules
Verified
Journal Article
Closed access
NSNivedita Sangaj
Nivedita Sangaj
PKPhillip Kyriakakis
Phillip Kyriakakis
DYDarren Yang
Darren Yang
CCChien-Wen Chang
Chien-Wen Chang
GAGaurav Arya
Gaurav Arya
SVShyni Varghese
Shyni Varghese

1 October 2021 in Brain, Behavior, and Immunity
Verified
Journal Article
Closed access
LCLourdes Fernández de Cossío
Lourdes Fernández de Cossío
CLChloé Lacabanne
Chloé Lacabanne
MBMaude Bordeleau
Maude Bordeleau
GCGarance Castino
Garance Castino
PKPhillip Kyriakakis
Phillip Kyriakakis
MTMarie-Ève Tremblay
Marie-Ève Tremblay

24 January 2018 in ACS Synthetic Biology
Verified
Journal Article
Open access
PKPhillip Kyriakakis
Phillip Kyriakakis
MCMarianne Catanho
Marianne Catanho
NHNicole Hoffner
Nicole Hoffner
WTWalter Thavarajah
Walter Thavarajah
VHVincent J. Hu
Vincent J. Hu
TCTodd Coleman
Todd Coleman
Transplanting metabolic reactions from one species into another has many uses as a research tool with applications ranging from optogenetics to crop production. Ferredoxin (Fd), the enzyme that most often supplies electrons to these reactions, is often overlooked when transplanting enzymes from one species to another because most cells already contain endogenous Fd. However, we have shown that the production of chromophores used in Phytochrome B (PhyB) optogenetics, is greatly enhanced in mammalian cells by expressing bacterial and plant Fds with ferredoxin-NADP+ reductases (FNR). We delineated the rate limiting factors and found that the main metabolic precursor, heme, was not the primary limiting factor for producing either the cyanobacterial or plant chromophores, phycocyanobilin or phytochromobilin, respectively. In fact, Fd is limiting, followed by Fd+FNR and finally heme. Using these findings, we optimized the PCB production system and for the first time, combined it with a tissue penetrating red/far-red sensing PhyB optogenetic gene switch in animal cells. We further characterized this system in several mammalian cell lines using red and far-red light. Importantly, we found that the light-switchable gene system remains active for several hours upon illumination, even with a short light pulse and requires very small amounts of light for maximal activation. Boosting chromophore production by matching metabolic pathways with specific ferredoxin systems will enable the unparalleled use of the many PhyB optogenetic tools and has broader implications for optimizing synthetic metabolic pathways.

27 August 2010 in The EMBO Journal
Verified
Journal Article
Open access
PDF file
MTMarla Tipping
Marla Tipping
YKYoosik Kim
Yoosik Kim
PKPhillip Kyriakakis
Phillip Kyriakakis
MTMei Tong
Mei Tong
SSStanislav Y Shvartsman
Stanislav Y Shvartsman
AVAlexey Veraksa
Alexey Veraksa
β‐Arrestins have been implicated in the regulation of multiple signalling pathways. However, their role in organism development is not well understood. In this study, we report a new in vivo function of the Drosophila β‐arrestin Kurtz (Krz) in the regulation of two distinct developmental signalling modules: MAPK ERK and NF‐κB, which transmit signals from the activated receptor tyrosine kinases (RTKs) and the Toll receptor, respectively. Analysis of the expression of effectors and target genes of Toll and the RTK Torso in krz maternal mutants reveals that Krz limits the activity of both pathways in the early embryo. Protein interaction studies suggest a previously uncharacterized mechanism for ERK inhibition: Krz can directly bind and sequester an inactive form of ERK, thus preventing its activation by the upstream kinase, MEK. A simultaneous dysregulation of different signalling systems in krz mutants results in an abnormal patterning of the embryo and severe developmental defects. Our findings uncover a new in vivo function of β‐arrestins and present a new mechanism of ERK inhibition by the Drosophila β‐arrestin Krz.