Abdessadek Rahimi

Dr. Abdessadek Rahimi

orcid

Research Focus & Metrics

Academic Career Length

2Years (2025-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
25 July 2025 in Pharmaceuticals
Verified
Journal Article
Open access
PDF file
ARAbdessadek Rahimi
Abdessadek Rahimi
OKOussama Khibech
Oussama Khibech
ABAbdessamad Benabbou
Abdessamad Benabbou
DMDr Merzouki
Dr Merzouki
MBMohamed Bouhrim
Mohamed Bouhrim
MEMaarouf Elbekay
Maarouf Elbekay
Background/Objectives: Oncogenic KRAS drives ~30% of solid tumours, yet the only approved G12C-specific drugs benefit ≈ 13% of KRAS-mutant patients, leaving a major clinical gap. We sought mutation-agnostic natural ligands from Ziziphus lotus, whose stereochemically rich phenolics may overcome this limitation by occupying the SI/II (Switch I/Switch II) groove and locking KRAS in its inactive state. Methods: Phytochemical mining yielded five recurrent phenolics, such as (+)-catechin, hyperin, astragalin, eriodictyol, and the prenylated benzoate amorfrutin A, benchmarked against the covalent inhibitor sotorasib. An in silico cascade combined SI/II docking, multi-parameter ADME/T (Absorption, Distribution, Metabolism, Excretion, and Toxicity) filtering, and 100 ns explicit solvent molecular dynamics simulations. Pharmacokinetic modelling predicted oral absorption, Lipinski compliance, mutagenicity, and acute-toxicity class. Results: Hyperin and astragalin showed the strongest non-covalent affinities (−8.6 kcal mol−1) by forging quadridentate hydrogen-bond networks that bridge the P-loop (Asp30/Glu31) to the α3-loop cleft (Asp119/Ala146). Catechin (−8.5 kcal mol−1) balanced polar anchoring with entropic economy. ADME ranked amorfrutin A the highest for predicted oral absorption (93%) but highlighted lipophilic solubility limits; glycosylated flavonols breached Lipinski rules yet remained non-mutagenic with class-5 acute-toxicity liability. Molecular dynamics trajectories confirmed that hyperin clamps the SI/II groove, suppressing loop RMSF below 0.20 nm and maintaining backbone RMSD stability, whereas astragalin retains pocket residence with transient re-orientation. Conclusions: Hyperin emerges as a low-toxicity, mutation-agnostic scaffold that rigidifies inactive KRAS. Deglycosylation, nano-encapsulation, or soft fluorination could reconcile permeability with durable target engagement, advancing Z. lotus phenolics toward broad-spectrum KRAS therapeutics.

15 July 2026 in Scientific Reports
Verified
Journal Article
Open access
ARAbdessadek Rahimi
Abdessadek Rahimi
OKOussama Khibech
Oussama Khibech
SKSalma Kadda
Salma Kadda
MYMeryem Idrissi Yahyaoui
Meryem Idrissi Yahyaoui
MBMohamed Bouhrim
Mohamed Bouhrim
MBMaarouf El Bekkaye
Maarouf El Bekkaye
Antimicrobial resistance and oxidative-stress-associated disorders motivate the search for edible, multi-component botanical matrices with measurable redox and anti-infective potential. Here, fruits of Ziziphus lotus and Ziziphus jujuba were investigated through an integrated chemistry-to-bioactivity-to-mechanism workflow combining polarity-guided Soxhlet extraction, GC-MS profiling of hexane fractions, UHPLC-MS/MS fingerprinting of acetone/methanolic fractions, total phenolic/flavonoid quantification, DPPH/ABTS antioxidant assays, and antimicrobial benchmarking using inhibition zones and resazurin-based MIC/MBC/MFC assays. The Z. lotus acetone fraction displayed the strongest phenolic enrichment (TPC = 124.33 ± 13.45 mg GAE g- 1 extract) and the lowest IC50 values (DPPH = 0.77 ± 0.02; ABTS = 0.19 ± 0.02 mg mL- 1). The lowest antibacterial MICs were observed for the Z. jujuba acetone fraction (0.415 mg mL- 1 against S. aureus, M. luteus and P. aeruginosa), whereas Rhodotorula glutinis was the most susceptible fungus (MIC/MFC = 0.415/5.20 mg mL- 1 with Z. jujuba methanol). Because the MIC values remain in the mg mL- 1 range, the extracts are interpreted as preliminary, moderate-potency anti-infective matrices. Redocking-validated docking, 100 ns molecular dynamics, PCA/free-energy landscape analysis, and 100-snapshot MM/GBSA were used as hypothesis-generating tools and identified stable conformational basins for D3R-4FS3, K3HDH-5JLC and UA-4UYL, with ensemble ΔGbind estimates of - 45.01, - 38.78 and - 46.06 kcal mol- 1, respectively. Overall, the work defines polarity-resolved Ziziphus chemotypes, cautiously links them to bioactivity patterns, and prioritizes fractions and compounds for direct enzyme assays, synergy testing, and formulation-oriented validation.