Demetra Rakosy

Dr. Demetra Rakosy

orcid

Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
21 November 2021 in Conservation Letters
Verified
Journal Article
Open access
PDF file
APAndrea Perino
Andrea Perino
HPHenrique Pereira
Henrique Pereira
MFMaria Felipe‐Lucia
Maria Felipe‐Lucia
HKHyeJin Kim
HyeJin Kim
HKHjalmar S. Kühl
Hjalmar S. Kühl
ABAletta Bonn
Aletta Bonn
National and local governments need to step up efforts to effectively implement the post‐2020 global biodiversity framework of the Convention on Biological Diversity to halt and reverse worsening biodiversity trends. Drawing on recent advances in interdisciplinary biodiversity science, we propose a framework for improved implementation by national and subnational governments. First, the identification of actions and the promotion of ownership across stakeholders need to recognize the multiple values of biodiversity and account for remote responsibility. Second, cross‐sectorial implementation and mainstreaming should adopt scalable and multifunctional ecosystem restoration approaches and target positive futures for nature and people. Third, assessment of progress and adaptive management can be informed by novel biodiversity monitoring and modeling approaches handling the multidimensionality of biodiversity change.

16 August 2020 in New Phytologist
Verified
Journal Article
Open access
PDF file
SDSusanne Dunker
Susanne Dunker
EMElena Motivans
Elena Motivans
DRDemetra Rakosy
Demetra Rakosy
DBDavid Boho
David Boho
PMPatrick Mäder
Patrick Mäder
TKTiffany M. Knight
Tiffany M. Knight
Summary: Pollen identification and quantification are crucial but challenging tasks in addressing a variety of evolutionary and ecological questions (pollination, paleobotany), but also for other fields of research (e.g. allergology, honey analysis or forensics). Researchers are exploring alternative methods to automate these tasks but, for several reasons, manual microscopy is still the gold standard. In this study, we present a new method for pollen analysis using multispectral imaging flow cytometry in combination with deep learning. We demonstrate that our method allows fast measurement while delivering high accuracy pollen identification. A dataset of 426 876 images depicting pollen from 35 plant species was used to train a convolutional neural network classifier. We found the best‐performing classifier to yield a species‐averaged accuracy of 96%. Even species that are difficult to differentiate using microscopy could be clearly separated. Our approach also allows a detailed determination of morphological pollen traits, such as size, symmetry or structure. Our phylogenetic analyses suggest phylogenetic conservatism in some of these traits. Given a comprehensive pollen reference database, we provide a powerful tool to be used in any pollen study with a need for rapid and accurate species identification, pollen grain quantification and trait extraction of recent pollen.

11 March 2022 in PLOS ONE
Verified
Journal Article
Open access
PDF file
DRDemetra Rakosy
Demetra Rakosy
EMElena Motivans
Elena Motivans
VŞValentin Ştefan
Valentin Ştefan
ANArkadiusz Nowak
Arkadiusz Nowak
SŚSebastian Świerszcz
Sebastian Świerszcz
TKTiffany Marie Knight
Tiffany Marie Knight
Complex socio-economic, political and demographic factors have driven the increased conversion of Europe’s semi-natural grasslands to intensive pastures. This trend is particularly strong in some of the most biodiverse regions of the continent, such as Central and Eastern Europe. Intensive grazing is known to decrease species diversity and alter the composition of plant and insect communities. Comparatively little is known, however, about how intensive grazing influences plant functional traits related to pollination and the structure of plant-pollinator interactions. In traditional hay meadows and intensive pastures in Central Europe, we contrasted the taxonomic and functional group diversity and composition, the structure of plant-pollinator interactions and the roles of individual species in networks. We found mostly lower taxonomic and functional diversity of plants and insects in intensive pastures, as well as strong compositional differences among the two grassland management types. Intensive pastures were dominated by a single plant with a specialized flower structure that is only accessible to a few pollinator groups. As a result, intensive pastures have lower diversity and specificity of interactions, higher amount of resource overlap, more uniform interaction strength and lower network modularity. These findings stand in contrast to studies in which plants with more generalized flower traits dominated pastures. Our results thus highlight the importance of the functional traits of dominant species in mediating the consequences of intensive pasture management on plant-pollinator networks. These findings could further contribute to strategies aimed at mitigating the impact of intensive grazing on plant and pollinator communities.

3 November 2021 in Plants, People, Planet
Verified
Journal Article
Open access
PDF file
THThomas Hornick
Thomas Hornick
ARAnett Richter
Anett Richter
WHWilliam Stanley Harpole
William Stanley Harpole
MBMaximilian Bastl
Maximilian Bastl
SBStephanie Bohlmann
Stephanie Bohlmann
SDSusanne Dunker
Susanne Dunker
Societal Impact Statement: Pollen relates to many aspects of human and environmental health, which protection and improvement are endorsed by the United Nations Sustainable Development Goals. By highlighting these connections in the frame of current challenges in monitoring and research, we discuss the need of more integrative and multidisciplinary pollen research related to societal needs, improving health of humans and our ecosystems for a sustainable future.Summary: Pollen is at once intimately part of the reproductive cycle of seed plants and simultaneously highly relevant for the environment (pollinators, vector for nutrients, or organisms), people (food safety and health), and climate (cloud condensation nuclei and climate reconstruction). We provide an interdisciplinary perspective on the many and connected roles of pollen to foster a better integration of the currently disparate fields of pollen research, which would benefit from the sharing of general knowledge, technical advancements, or data processing solutions. We propose a more interdisciplinary and holistic research approach that encompasses total environmental pollen diversity (ePD) (wind and animal and occasionally water distributed pollen) at multiple levels of diversity (genotypic, phenotypic, physiological, chemical, and functional) across space and time. This interdisciplinary approach holds the potential to contribute to pressing human issues, including addressing United Nations Sustainable Development Goals, fostering social and political awareness of these tiny yet important and fascinating particles.

7 June 2022 in Cytometry Part A
Verified
Journal Article
Open access
SDSusanne Dunker
Susanne Dunker
MBMatthew Boyd
Matthew Boyd
WDWalter Durka
Walter Durka
Silvio ErlerSilvio Erler
Silvio Erler
WHW. Stanley Harpole
W. Stanley Harpole
CWChristian Wilhelm
Christian Wilhelm
Environmental monitoring involves the quantification of microscopic cells and particles such as algae, plant cells, pollen, or fungal spores. Traditional methods using conventional microscopy require expert knowledge, are time‐intensive and not well‐suited for automated high throughput. Multispectral imaging flow cytometry (MIFC) allows measurement of up to 5000 particles per second from a fluid suspension and can simultaneously capture up to 12 images of every single particle for brightfield and different spectral ranges, with up to 60x magnification. The high throughput of MIFC has high potential for increasing the amount and accuracy of environmental monitoring, such as for plant‐pollinator interactions, fossil samples, air, water or food quality that currently rely on manual microscopic methods. Automated recognition of particles and cells is also possible, when MIFC is combined with deep‐learning computational techniques. Furthermore, various fluorescence dyes can be used to stain specific parts of the cell to highlight physiological and chemical features including: vitality of pollen or algae, allergen content of individual pollen, surface chemical composition (carbohydrate coating) of cells, DNA‐ or enzyme‐activity staining. Here, we outline the great potential for MIFC in environmental research for a variety of research fields and focal organisms. In addition, we provide best practice recommendations.

16 October 2017 in Journal of Evolutionary Biology
Verified
Journal Article
Closed access
PDF file
DRDemetra Rakosy
Demetra Rakosy
MCMónica Cuervo
Mónica Cuervo
HPH. F. Paulus
H. F. Paulus
MAM. Ayasse
M. Ayasse