Sicyopterus lagocephalus post-larvae migrating in Mascarene Archipelago rivers, La Réunion Island, provide an important food source to local populations and fishing activity has a socioeconomic impact. Improved knowledge of the life traits and the characterisation of post-larval stages should enable a better understanding of physiological changes triggering migratory behaviour. It would also help to explain the recruitment processes to managers and to implement conservation measures for stock management. Sicyopterus lagocephalus is an amphidromous fish: adults live in rivers, but larvae are carried to the sea after hatching. The present study characterised the metamorphosis and post-larval stages of Sicyopterus lagocephalus during river recolonisation on La Réunion Island. The results show that cranium reorganisation and pectoral fins transformation are part of the first and major transformations and are completed less than 2 weeks after freshwater colonisation (post-larval stages PL1 and PL2). These transformations, mobilising all the available calcium, seem to be critical for survival in their new environment. Individuals then progressively acquire pigmentation, complete scalation and the fork at the end of the caudal fin disappears (juvenile stages J1 and J2). The end of the recruitment phase takes place 21 to 28 days after entering the river mouth, when territorial behaviour appears.

Despite the impressive growth of sequence databases, the limited availability of nuclear markers that are sufficiently polymorphic for population genetics and phylogeography and applicable across various phyla restricts many potential studies, particularly in non-model organisms. Numerous introns have invariant positions among kingdoms, providing a potential source for such markers. Unfortunately, most of the few known EPIC (Exon Primed Intron Crossing) loci are restricted to vertebrates or belong to multigenic families.

Molecular tools are increasingly applied for assessing and monitoring biodiversity and informing conservation action. While recent developments in genetic and genomic methods provide greater sensitivity in analysis and the capacity to address new questions, they are not equally available to all practitioners: There is considerable bias across institutions and countries in access to technologies, funding, and training. Consequently, in many cases, more accessible traditional genetic data (e.g., microsatellites) are still utilized for making conservation decisions. Conservation approaches need to be pragmatic by tackling clearly defined management questions and using the most appropriate methods available, while maximizing the use of limited resources. Here we present some key questions to consider when applying the molecular toolbox for accessible and actionable conservation management. Finally, we highlight a number of important steps to be addressed in a collaborative way, which can facilitate the broad integration of molecular data into conservation.