Chathathayil Mohammedali Shafeeque

Dr. Chathathayil Mohammedali Shafeeque

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Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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27 February 2015 in Environmental Toxicology and Chemistry
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Journal Article
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RSRam Pratap Singh
Ram Pratap Singh
CSChathathayil Mohammedali Shafeeque
Chathathayil Mohammedali Shafeeque
SSSanjeev K. Sharma
Sanjeev K. Sharma
NPNitin K. Pandey
Nitin K. Pandey
RSRenu Singh
Renu Singh
PAParappurath A. Azeez
Parappurath A. Azeez

1 October 2014 in Animal Reproduction Science
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Journal Article
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CSChathathayil Mohammedali Shafeeque
Chathathayil Mohammedali Shafeeque
RSRam Pratap Singh
Ram Pratap Singh
SSS.K. Sharma
S.K. Sharma
JMJ. Mohan
J. Mohan
KSK.V.H. Sastry
K.V.H. Sastry
PAP.A. Azeez
P.A. Azeez

1 March 2016 in Genome
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Journal Article
Closed access
RSRam Pratap Singh
Ram Pratap Singh
CSChathathayil Mohammedali Shafeeque
Chathathayil Mohammedali Shafeeque
SSS.K. Sharma
S.K. Sharma
JMJ. Mohan
J. Mohan
KSK.V.H. Sastry
K.V.H. Sastry
PAP.A. Azeez
P.A. Azeez
It has been confirmed that mammalian sperm contain thousands of functional RNAs, and some of them have vital roles in fertilization and early embryonic development. Therefore, we attempted to characterize transcriptome of the sperm of fertile chickens using microarray analysis. Spermatozoal RNA was pooled from 10 fertile males and used for RNA preparation. Prior to performing the microarray, RNA quality was assessed using a bioanalyzer, and gDNA and somatic cell RNA contamination was assessed by CD4 and PTPRC gene amplification. The chicken sperm transcriptome was cross-examined by analysing sperm and testes RNA on a 4 × 44K chicken array, and results were verified by RT-PCR. Microarray analysis identified 21 639 predominantly nuclear-encoded transcripts in chicken sperm. The majority (66.55%) of the sperm transcripts were shared with the testes, while surprisingly, 33.45% transcripts were detected (raw signal intensity greater than 50) only in the sperm and not in the testes. The greatest proportion of up-regulated transcripts were responsible for signal transduction (63.20%) followed by embryonic development (56.76%) and cell structure (56.25%). Of the 20 most abundant transcripts, 18 remain uncharacterized, whereas the least abundant genes were mostly associated with the ribosome. These findings lay a foundation for more detailed investigations on sperm RNAs in chickens to identify sperm-based biomarkers for fertility.

28 December 2020 in PLOS ONE
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Journal Article
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AKArun K.
Arun K.
CSChathathayil Mohammedali Shafeeque
Chathathayil Mohammedali Shafeeque
JSJayanand B. Sudhir
Jayanand B. Sudhir
MBMoinak Banerjee
Moinak Banerjee
SNSylaja P. N.
Sylaja P. N.
Background and purpose: Polymorphisms in Ring Finger Protein 213 (RNF 213) gene have been detected to confer genetic susceptibility to Moya moya disease (MMD) in the East Asian population. We investigated the frequency of RNF 213 gene polymorphism and its association with MMD phenotypes in the Indian population. Materials and methods: A case-control study for RNF 213 polymorphism involving 65 MMD patients, 75 parents, and 120 controls were performed. A total of 21 SNPs were screened, of which 17 SNPs were monomorphic. Allelic and genotypic frequency of all polymorphic SNPs were assessed and its association with MMD phenotypes was evaluated. Results: The median age of symptom onset was 9 (range 2–17) and 37 years (range 20–58) in paediatric and adult patients respectively. A strong association was observed with RNF 213 rs112735431(p.R4810K) and MMD. Out of 65 patients with MMD, five patients carried the homozygous risk AA genotype. None of the healthy controls carried this homozygous mutation. The mutant allele was detected in MMD patients from Tamil Nadu and North eastern states of India (p = <0.0001). All the patients carrying the mutant allele had an early age of onset (p = <0.0001), higher incidence of bilateral disease (p = <0.002), positive family history (p = 0.03), higher Suzuki angiographic stage (≥3) (p<0.0006) and recurrent neurological events (ischemic strokes and TIAs) (p = <0.009). Conclusion: The homozygous rs112735431(p.R4810K) variant in RNF 213 variant not only predicts the risk for MMD but can also predict the phenotypic variants.

1 June 2016 in Ecotoxicology and Environmental Safety
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Journal Article
Closed access
RSRam Pratap Singh
Ram Pratap Singh
CSChathathayil Mohammedali Shafeeque
Chathathayil Mohammedali Shafeeque
SSSanjeev K. Sharma
Sanjeev K. Sharma
RSRenu Singh
Renu Singh
MKMaharajan Kannan
Maharajan Kannan
PAParappurath A. Azeez
Parappurath A. Azeez

8 April 2020 in Epigenomics
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Journal Article
Closed access
CSChathathayil Mohammedali Shafeeque
Chathathayil Mohammedali Shafeeque
SSSanish Sathyan
Sanish Sathyan
KSKoramannil Radha Saradalekshmi
Koramannil Radha Saradalekshmi
SPSasi Premkumar
Sasi Premkumar
JAJacob P Allapatt
Jacob P Allapatt
MBMoinak Banerjee
Moinak Banerjee
Aim: Intracranial aneurysm is often asymptomatic until the time of rupture. Elevated homocysteine is reported in vascular diseases. Identifying early events in homocysteine metabolism through methy...