Qingshan Shi

Dr. Qingshan Shi

orcid

Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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12 October 2010 in BioMetals
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Journal Article
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WLWen-Ru Li
Wen-Ru Li
XXXiao-Bao Xie
Xiao-Bao Xie
QSQingshan Shi
Qingshan Shi
SDShun-Shan Duan
Shun-Shan Duan
YOYou-Sheng Ouyang
You-Sheng Ouyang
YCYi-Ben Chen
Yi-Ben Chen

28 June 2023 in Microorganisms
Verified
Journal Article
Open access
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GZGang Zhou
Gang Zhou
QWQian Wang
Qian Wang
YWYingsi Wang
Yingsi Wang
XWXia Wen
Xia Wen
HPHong Peng
Hong Peng
LLLiangqiu Li
Liangqiu Li
Gram-negative bacteria depend on their cell membranes for survival and environmental adaptation. They contain two membranes, one of which is the outer membrane (OM), which is home to several different outer membrane proteins (Omps). One class of important Omps is porins, which mediate the inflow of nutrients and several antimicrobial drugs. The microorganism’s sensitivity to antibiotics, which are predominantly targeted at internal sites, is greatly influenced by the permeability characteristics of porins. In this review, the properties and interactions of five common porins, OmpA, OmpC, OmpF, OmpW, and OmpX, in connection to porin-mediated permeability are outlined. Meanwhile, this review also highlighted the discovered regulatory characteristics and identified molecular mechanisms in antibiotic penetration through porins. Taken together, uncovering porins’ functional properties will pave the way to investigate effective agents or approaches that use porins as targets to get rid of resistant gram-negative bacteria.

1 November 2018 in Carbohydrate Polymers
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Journal Article
Closed access
MCMingjie Chen
Mingjie Chen
TRTROY RUNGE
TROY RUNGE
LWLingling Wang
Lingling Wang
RLRuimin Li
Ruimin Li
JFJing Feng
Jing Feng
QSQingshan Shi
Qingshan Shi

7 March 2016 in Scientific Reports
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Journal Article
Open access
WLWen-Ru Li
Wen-Ru Li
QSQingshan Shi
Qingshan Shi
HDHuan-Qin Dai
Huan-Qin Dai
QLQing Liang
Qing Liang
XXXiao-Bao Xie
Xiao-Bao Xie
LZLixin Zhang
Lixin Zhang
The antifungal activity, kinetics and molecular mechanism of action of garlic oil againstCandida albicanswere investigated in this study using multiple methods. Using the poisoned food technique, we determined that the minimum inhibitory concentration of garlic oil was 0.35 μg/mL. Observation by transmission electron microscopy indicated that garlic oil could penetrate the cellular membrane ofC. albicansas well as the membranes of organelles such as the mitochondria, resulting in organelle destruction and ultimately cell death. RNA sequencing analysis showed that garlic oil induced differential expression of critical genes including those involved in oxidation-reduction processes, pathogenesis and cellular response to drugs and starvation. Moreover, the differentially expressed genes were mainly clustered in 19 KEGG pathways, representing vital cellular processes such as oxidative phosphorylation, the spliceosome, the cell cycle and protein processing in the endoplasmic reticulum. In addition, four upregulated proteins selected after two-dimensional fluorescence difference in gel electrophoresis (2D-DIGE) analysis were identified with high probability by mass spectrometry as putative cytoplasmic adenylate kinase, pyruvate decarboxylase, hexokinase and heat shock proteins. This is suggestive of aC. albicansstress responses to garlic oil treatment. On the other hand, a large number of proteins were downregulated, leading to significant disruption of the normal metabolism and physical functions ofC. albicans.

Verified
Journal Article
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GZGang Zhou
Gang Zhou
QSQingshan Shi
Qingshan Shi
XHXiao-Mo Huang
Xiao-Mo Huang
XXXiao-Bao Xie
Xiao-Bao Xie
Antimicrobial agents target a range of extra- and/or intracellular loci from cytoplasmic wall to membrane, intracellular enzymes and genetic materials. Meanwhile, many resistance mechanisms employed by bacteria to counter antimicrobial agents have been found and reported in the past decades. Based on their spatially distinct sites of action and distribution of location, antimicrobial resistance mechanisms of bacteria were categorized into three groups, coined the three lines of bacterial defense in this review. The first line of defense is biofilms, which can be formed by most bacteria to overcome the action of antimicrobial agents. In addition, some other bacteria employ the second line of defense, the cell wall, cell membrane, and encased efflux pumps. When antimicrobial agents permeate the first two lines of defense and finally reach the cytoplasm, many bacteria will make use of the third line of defense, including alterations of intracellular materials and gene regulation to protect themselves from harm by bactericides. The presented three lines of defense theory will help us to understand the bacterial resistance mechanisms against antimicrobial agents and design efficient strategies to overcome these resistances.

15 December 2022 in Materials Today Bio
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Journal Article
Open access
MCMingjie Chen
Mingjie Chen
YLYan Li
Yan Li
HLHuiming Liu
Huiming Liu
DZDandan Zhang
Dandan Zhang
QSQingshan Shi
Qingshan Shi
XXXiao-Bao Xie
Xiao-Bao Xie
Lignin is a natural aromatic polymer of p-hydroxyphenylpropanoids with various biological activities. Noticeably, plants have made use of lignin as biocides to defend themselves from pathogen microbial invasions. Thus, the use of isolated lignin as environmentally benign antimicrobial is believed to be a promising high value approach for lignin valorization. On the other hand, as green and sustainable product of plant photosynthesis, lignin should be beneficial to reduce the carbon footprint of antimicrobial industry. There have been many reports that make use of lignin to prepare antimicrobials for different applications. However, lignin is highly heterogeneous polymers different in their monomers, linkages, molecular weight, and functional groups. The structure and property relationship, and the mechanism of action of lignin as antimicrobial remains ambiguous. To show light on these issues, we reviewed the publications on lignin chemistry, antimicrobial activity of lignin models and isolated lignin and associated mechanism of actions, approaches in synthesis of lignin with improved antimicrobial activity, and the applications of lignin as antimicrobial in different fields. Hopefully, this review will help and inspire researchers in the preparation of lignin antimicrobial for their applications.