Bo Ma

Dr. Bo Ma


Research Focus & Metrics

Academic Career Length

5Years (2022-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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18 October 2022 in Agronomy
Verified
Journal Article
Open access
PDF file
MYMing Yuan
Ming Yuan
YBYingdong Bi
Yingdong Bi
DHDongwei Han
Dongwei Han
LWLing Wang
Ling Wang
LWLianxia Wang
Lianxia Wang
CLCaiyong Lai
Caiyong Lai
Although crop rotations have been widely shown as an effective approach for improving yield or soil quality in the long term, the relationship between crop rotations and quality traits of crop or biochar-based fertilization is still unclear. To address this, we conducted a long-term field experiment in the Heilongjiang province of China to investigate the effects of crop rotation and biochar-based fertilizer application on the crop yield, soil parameters, crop quality, and agronomic traits in 2014–2020. The effects of rotations on crop production and soil properties were evaluated with the average yield variability during the 7 years of this study. Our results showed that the diversified corn and soybean rotations had a significant positive effect on average crop yield compared with their monocultures. The corn yield was enhanced by 0.6 Mg ha−1 (5.4%) in the corn–soybean–corn (CSC) crop sequence compared with monoculture corn. Similarly, soybean yield was enhanced by 0.21 Mg ha−1 (9.7%) in the soybean–corn–corn (SCC) crop sequence compared with monoculture soybean. However, a negative effect of crop rotations was detected on the protein content of soybean compared with the monoculture soybean, while a positive effect was detected on oil content. Additionally, no differences were detected in crop yield between biochar-based fertilization and mineral fertilization treatments, but a significant positive effect of biochar-based fertilization was observed for any crop on both protein and oil content. A significant effect of crop rotation was found on the percentage of total soil N (TN), available soil N (AN), and available soil K (AK) content. The SSS crop sequence treatment illustrated the highest TN values at 0.18%. The CCC crop sequence treatment increased AN and AK content by 9.1% and 7.8%, respectively, compared with SSS (p < 0.05). We conclude that crop rotations increase crop yield and biochar-based fertilizer application, improving crop quality traits in the long term. Thus, the addition of biochar-based fertilizer could efficiently enhance the yield and quality of crop in the rotation cropping system. The findings of this study may provide useful information for designing sustainable cropping systems based on rotations.

25 June 2022 in Molecules
Verified
Journal Article
Open access
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YHYan He
Yan He
WZWei Zhang
Wei Zhang
YMYongcai Ma
Yongcai Ma
JLJinyang Li
Jinyang Li
BMBo Ma
Bo Ma
Rice blast is a serious threat to rice yield. Breeding disease-resistant varieties is one of the most economical and effective ways to prevent damage from rice blast. The traditional identification of resistant rice seeds has some shortcoming, such as long possession time, high cost and complex operation. The purpose of this study was to develop an optimal prediction model for determining resistant rice seeds using Ranman spectroscopy. First, the support vector machine (SVM), BP neural network (BP) and probabilistic neural network (PNN) models were initially established on the original spectral data. Second, due to the recognition accuracy of the Raw-SVM model, the running time was fast. The support vector machine model was selected for optimization, and four improved support vector machine models (ABC-SVM (artificial bee colony algorithm, ABC), IABC-SVM (improving the artificial bee colony algorithm, IABC), GSA-SVM (gravity search algorithm, GSA) and GWO-SVM (gray wolf algorithm, GWO)) were used to identify resistant rice seeds. The difference in modeling accuracy and running time between the improved support vector machine model established in feature wavelengths and full wavelengths (200–3202 cm−1) was compared. Finally, five spectral preproccessing algorithms, Savitzky–Golay 1-Der (SGD), Savitzky–Golay Smoothing (SGS), baseline (Base), multivariate scatter correction (MSC) and standard normal variable (SNV), were used to preprocess the original spectra. The random forest algorithm (RF) was used to extract the characteristic wavelengths. After different spectral preproccessing algorithms and the RF feature extraction, the improved support vector machine models were established. The results show that the recognition accuracy of the optimal IABC-SVM model based on the original data was 71%. Among the five spectral preproccessing algorithms, the SNV algorithm’s accuracy was the best. The accuracy of the test set in the IABC-SVM model was 100%, and the running time was 13 s. After SNV algorithms and the RF feature extraction, the classification accuracy of the IABC-SVM model did not decrease, and the running time was shortened to 9 s. This demonstrates the feasibility and effectiveness of IABC in SVM parameter optimization, with higher prediction accuracy and better stability. Therefore, the improved support vector machine model based on Ranman spectroscopy can be applied to the fast and non-destructive identification of resistant rice seeds.

12 October 2022 in Agriculture
Verified
Journal Article
Open access
PDF file
JGJiaxin Gao
Jiaxin Gao
FTFeng Tan
Feng Tan
JCJiapeng Cui
Jiapeng Cui
BMBo Ma
Bo Ma
Obtaining the number of plants is the key to evaluating the effect of maize mechanical sowing, and is also a reference for subsequent statistics on the number of missing seedlings. When the existing model is used for plant number detection, the recognition accuracy is low, the model parameters are large, and the single recognition area is small. This study proposes a method for detecting the number of maize seedlings based on an improved You Only Look Once version 4 (YOLOv4) lightweight neural network. First, the method uses the improved Ghostnet as the model feature extraction network, and successively introduces the attention mechanism and k-means clustering algorithm into the model, thereby improving the detection accuracy of the number of maize seedlings. Second, using depthwise separable convolutions instead of ordinary convolutions makes the network more lightweight. Finally, the multi-scale feature fusion network structure is improved to further reduce the total number of model parameters, pre-training with transfer learning to obtain the optimal model for prediction on the test set. The experimental results show that the harmonic mean, recall rate, average precision and accuracy rate of the model on all test sets are 0.95%, 94.02%, 97.03% and 96.25%, respectively, the model network parameters are 18.793 M, the model size is 71.690 MB, and frames per second (FPS) is 22.92. The research results show that the model has high recognition accuracy, fast recognition speed, and low model complexity, which can provide technical support for corn management at the seedling stage.

18 July 2022 in Agriculture
Verified
Journal Article
Open access
PDF file
RLRui Liu
Rui Liu
FTFeng Tan
Feng Tan
YWyaxuan wang
yaxuan wang
BMBo Ma
Bo Ma
MYMing Yuan
Ming Yuan
ZXZhao Xin
Zhao Xin
The core of saline-alkali land improvement is planting suitable plants. Planting rice in saline-alkali land can not only effectively improve saline-alkali soil, but also increase grain yield. However, traditional identification methods for saline-alkali-tolerant rice varieties require tedious and time-consuming field investigations based on growth indicators by rice breeders. In this study, the visualization method of Python data processing was used to analyze the Raman spectroscopy of japonica rice in order to study a simple and efficient identification method of saline-alkali-tolerant japonica rice varieties. Three saline-alkali-tolerant japonica varieties and three saline-alkali-sensitive japonica varieties were collected from control and saline-alkali-treated fields, respectively, and the Raman spectra of 432 samples were obtained. The data preprocessing stage used filtering-difference method to process Raman spectral data to complete interference reduction and crests extraction. In the feature selection stage, scipy.signal.find_peaks (SSFP), SelectKBest (SKB) and recursive feature elimination (RFE) were used for machine feature selection of spectral data. According to the feature dimension obtained by machine feature selection, dataset partitioning by K-fold CV, the typical linear logistic regression (LR) and typical nonlinear support vector machine (SVM) models were established for classification. Experimental results showed that the typical nonlinear SVM identification model based on both RFE machine feature selection and six-fold CV dataset partitioning had the best identification rate, which was 94%. Therefore, the SVM classification model proposed in this study could provide help in the intelligent identification of saline-alkali-tolerant japonica rice varieties.

29 April 2022 in Plants
Verified
Journal Article
Open access
PDF file
BMBo Ma
Bo Ma
CLChuanzeng Liu
Chuanzeng Liu
HFHu Ji Fang
Hu Ji Fang
LKLiu Kai
Liu Kai
FZFuyang Zhao
Fuyang Zhao
TFTan Ke fei
Tan Ke fei
Planting rice in saline–alkali land can effectively improve saline–alkali soil and increase grain yield, but traditional identification methods for saline–alkali-tolerant rice varieties require tedious and time-consuming field investigations based on growth indicators by rice breeders. In this study, the Python machine deep learning method was used to analyze the Raman molecular spectroscopy of rice and assist in feature attribution, in order to study a fast and efficient identification method of saline–alkali-tolerant rice varieties. A total of 156 Raman spectra of four rice varieties (two saline–alkali-tolerant rice varieties and two saline–alkali-sensitive rice varieties) were analyzed, and the wave crests were extracted by an improved signal filtering difference method and the feature information of the wave crest was automatically extracted by scipy.signal.find_peaks. Select K Best (SKB), Recursive Feature Elimination (RFE) and Select F Model (SFM) were used to select useful molecular features. Based on these feature selection methods, a Logistic Regression Model (LRM) and Random Forests Model (RFM) were established for discriminant analysis. The experimental results showed that the RFM identification model based on the RFE method reached a higher recognition rate of 89.36%. According to the identification results of RFM and the identification of feature attribution materials, amylum was the most significant substance in the identification of saline–alkali-tolerant rice varieties. Therefore, an intelligent method for the identification of saline–alkali-tolerant rice varieties based on Raman molecular spectroscopy is proposed.

4 December 2025 in Genes
Verified
Journal Article
Open access
PDF file
HDHaoqiang Du
Haoqiang Du
XWXingyu Wang
Xingyu Wang
HFHu Ji Fang
Hu Ji Fang
TFTan Ke fei
Tan Ke fei
CLChuanzeng Liu
Chuanzeng Liu
BMBo Ma
Bo Ma
Background: As key members of the plant receptor-like kinase family, rice CrRLK1Ls play diverse roles in plant growth, development, and stress responses. Although rice CrRLK1Ls have been initially characterized, our understanding of their functions remains limited. Methods: We identified OsCrRLK1L genes via Hidden Markov Model (HMM) searches against the rice genome. Subsequent analyses encompassed their physicochemical properties, chromosomal distribution, gene structure, phylogenetic relationships, conserved domains, and cis-acting elements.Salt-responsive candidates were screened using a GEO dataset, and their expression profiles were validated under salt stress using quantitative real-time PCR. Result: A total of 36 OsCrRLK1L genes, all containing both Malectin and tyrosine kinase domains, were identified in the rice genome and showed an uneven chromosomal distribution. Phylogenetic analysis classified them into three subclades, with Group II and Group III being specific to rice and Arabidopsis thaliana, respectively. Promoter analysis revealed that the promoter regions of these genes contained an abundance of cis-acting elements related to hormone and stress responses. RNA-Seq and enrichment analysis indicated that OsCrRLK1L genes exhibit tissue specificity and participate in salt stress responses. Furthermore, CrRLK1L2 and CrRLK1L10 showed tissue-specific differential expression under salt stress. Conclusions: In summary, our study lays the groundwork for future research into the biological roles of OsCrRLK1L genes during salt stress.